Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Mexican Genomic Database for Addiction Research

ABSTRACT: Pharmacogenomics in the Mexican Genomic Database for Addiction Research

INSTRUMENT(S): -

ORGANISM(S): Homo Sapiens

SUBMITTER: INMGEN

PROVIDER: PRJEB37766 | EVA | 2020-05-11

REPOSITORIES: EVA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	MxGDAR_Encodat-PGx_removed_duplicate_invalid_and_nonrefmatching.vcf.gz	Vcf
	MxGDAR_Encodat-PGx_removed_duplicate_invalid_and_nonrefmatching.vcf.gz.tbi	Vcf

Items per page:

1 - 2 of 2

Similar Datasets

Genomic Postmortem Research Project study

Project description:Genomic Postmortem Research Project study

| PRJNA1030496 | ENA

Genomic Postmortem Research Project study

Project description:Genomic Postmortem Research Project study

| PRJNA1030497 | ENA

Genomic Resources for Birdsong Research

Project description:Genomic Resources for Birdsong Research

| PRJNA99653 | ENA

Research on genomic test utilizing next generation sequencer for solid tumors and development of the genome database

Project description:Interventions: Genomic test CANCERPLEX-JP OncoGuide NCC oncopanel system FndationONe CDx genome profile GUARDANT360 MSI Analysis System BRACAnalysis Primary outcome(s): Development of genome database Study Design: Single arm Non-randomized

| 2643590 | ecrin-mdr-crc

Genomic Resources for Birdsong Research

Project description:Vocal learning and neuronal replacement have been studied extensively in the songbird brain, but until recently, few molecular and genomic tools have been available for this work. Here we describe new molecular/genomic resources for songbird research. We made cDNA libraries from zebra finch (Taeniopygia guttata) brains at different developmental stages. A total of 11000 clones were sequenced from these libraries, representing 5870 unique gene transcripts. A web-based database has been established for sequence analysis and functional annotations. The cDNA libraries were not normalized. Sequence analysis revealed that a cDNA library made from brains at post-hatching day 30-50, when the song system goes through rapid development and birds learn to sing, shows the highest gene discovery rate. We grouped genes into functional categories according to the Gene Ontology classification and found that expression of the functional categories changed as the brain developed. We also identified five microRNAs whose sequences are highly conserved between zebra finch and other species. We printed cDNA microarrays and profiled gene expression in the HVC of both adult male zebra finches and canaries (Serinus canaria). Statistical Analysis of Microarrays (SAM) was used for data analysis. A subset of the differentially regulated genes was validated by in situ hybridization. The bioinformatic tools EASE and Ingenuity Pathway Analysis were used to identify over-represented functional groups and gene networks among the regulated genes. These resources provide songbird biologists with tools for genome annotation, comparative genomics, and microarray gene expression analysis. Keywords: HVC, songbird, cDNA microarray, gene expression

2006-12-06 | GSE6412 | GEO

Project description:Mexican Genomic Database for Addiction Research

| PRJEB37766 | ENA

Black Representation in Genomic Research Whole Blood eQTL Study

Project description:Black Representation in Genomic Research Whole Blood eQTL Study

| PRJNA852853 | ENA

Black Representation in Genomic Research Whole Blood eQTL Study

Project description:Black Representation in Genomic Research Whole Blood eQTL Study

| PRJNA852854 | ENA

Pediatric Reporting of Adult-Onset Genomic Results

Project description:The Investigators will conduct a longitudinal, mixed-methods cohort study to assess primary and secondary psychosocial outcomes among 705 MyCode pediatric participants and their parents, and health behaviors of parents whose children receive an adult- or pediatric-onset genomic result. Data will be gathered via quantitative surveys using validated measures of distress, family functioning, quality of life, body image, perceived cancer/heart disease risk, genetic counseling satisfaction, genomics knowledge, and adjustment to genetic information; qualitative interviews with adolescents and parents; and electronic health records review of parents’ cascade testing uptake and initiation of risk reduction behaviors. The investigators will also conduct empirical and theoretical legal research to examine the loss of chance doctrine and its applicability to genomic research.

| 2296574 | ecrin-mdr-crc

Goldfish Genome Research

Project description:Goldfish Genome Research

| PRJEB23594 | ENA