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Polymorphism identification through exome and transcriptome analysis of pigs affected with umbilical hernia

ABSTRACT: Umbilical hernia (UH) is one of the most frequent defects affecting pig production, however, it also affects humans and other mammals. UH is characterized as an abnormal protrusion of the abdominal contents to the umbilical region, causing pain, discomfort and reduced performance in pigs. To clarify the genetic basis of swine umbilical hernia, this study aimed to identify polymorphisms and genes associated with UH in pigs through the whole-exome sequencing and additional transcriptome data analyses

INSTRUMENT(S): Illumina HiSeq 2500

ORGANISM(S): Sus Scrofa

SUBMITTER: EMBRAPA Swine and Poultry

PROVIDER: PRJEB48002 | EVA | 2022-03-01

REPOSITORIES: EVA

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			Action	DRS
	SNPs_Filtered_Exome.accessioned.vcf.gz	Vcf
	SNPs_Filtered_Exome.accessioned.vcf.gz.csi	Vcf
	SNPs_Filtered_Exome.accessioned.vcf.gz.tbi	Vcf
	SNPs_Filtered_Exome.vcf.gz	Vcf
	SNPs_Filtered_Exome.vcf.gz.csi	Vcf

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