Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Camta3 mutant versus wild type microarray analysis

ABSTRACT: camta3-1, camta3-2 and WT microarray experiments, statistical and bioinformatics analysis Keywords: expression analysis; mutant versus wild type comparison

ORGANISM(S): Arabidopsis thaliana

PROVIDER: GSE10568 | GEO | 2008/02/20

SECONDARY ACCESSION(S): PRJNA107823

REPOSITORIES: GEO

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
		Other

Items per page:

1 - 1 of 1

Similar Datasets

Microarray Analysis of ttg1 versus Wild-Type Developing Seeds

Project description:Microarray Analysis of ttg1 versus Wild-Type Developing Seeds

| PRJNA623509 | ENA

Transcription profiling of Arabidopsis 3 week-old camta3-1 mutant (HF5 and HF9), camta3-2 mutant (HF6 and HF10) and wild type-WT (HF7 and HF8)

Project description:camta3-1, camta3-2 and WT microarray experiments, statistical and bioinformatics analysis Experiment Overall Design: Two biological replicates were taken for 3âweek-old camta3-1 mutant (HF5 and HF9), camta3-2 mutant (HF6 and HF10) and wild type-WT (HF7 and HF8)

2008-04-07 | E-GEOD-10568 | biostudies-arrayexpress

Leishmania infantum: Alba20 null mutant Vs wild type

Project description:Transcriptome analysis of an LiAlba20 (LinJ.34.2410) null mutant strain versus Wild type. Experiments were run with promastigotes and axenic amastigotes independently. Null mutant was produced by homologous recombination, replacing both alleles with Hygromycin phosphotransferase and Puromycin.

2014-12-31 | GSE49825 | GEO

Wild-type versus Pumilio mutant flies

Project description:Total RNA was isolated with TRIZOL reagent from wild-type flies (yellow white, yw) and Pumilio mutant flies (pum13; Barker DD. et al. (1992) Genes Dev 6, 2312-26). 12 microgram of total RNA was used for cDNA synthesis using a 1:1 mixture of oligo(dT) and random nonamer primers and in the presence of amino-allyl dUTP. Set of arrays that are part of repeated experiments Keywords: Biological Replicate

2006-02-28 | GSE3580 | GEO

E. Coli Nissle wild type versus knockout strain

Project description:E. Coli Nissle wild type versus knockout strain grown in M-9 media.

2019-01-31 | MSV000083387 | MassIVE

Wild Type 11168 versus LuxS01 Mutant Cultured in MHB and MEM- α media

Project description:Transcriptional profiling of Campylobacter jejuni NCTC 11168 wild type versus LuxS01 mutant strain grown in a minimal culture medium (MEM- α ) versus complex culture medium (MHB).

2009-10-08 | GSE18451 | GEO

GNPS - E. Coli Nissle wild type versus knockout strain

Project description:E. Coli Nissle wild type versus knockout strain grown in M-9 media.

2019-01-31 | MSV000083387 | GNPS

RNAseq Quantitative Analysis of Arabidopsis Wild Type versus transcription factor dof4-1 mutant

Project description:RNAseq Quantitative Analysis of Arabidopsis Wild Type versus transcription factor dof4-1 mutant

| PRJNA814226 | ENA

RNAseq Quantitative Analysis of Arabidopsis Wild Type versus flavonoid 3' hydroxylase tt7 mutant

Project description:RNAseq Quantitative Analysis of Arabidopsis Wild Type versus flavonoid 3' hydroxylase tt7 mutant

| PRJNA812901 | ENA

Gis2 mutant versus wild-type cells

Project description:To measure the relative changes of gene expression upon Gis2p depletion, 50 ml of delta Gis2 cells or the respective wild-type strain BY4741 were grown in YPD at 30 degrees celsius to an OD600 of 0.5- 0.6. Cells were harvested by centrifugation and washed twice with 5ml of bidistilled water (ddH2O). RNA was isolated by hot phenol extraction for microarray analysis. 20 ug of total RNA derived from wild-type and knock-out cells were reverse transcribed in the presence of 5-(3-aminoallyl)-dUTP and natural dNTPs with a mixture of N9 and dT20V primers, and cDNAs were covalently linked to Cy3 and Cy5 NHS-monoesters (GE HealthSciences Cat# RPN5661), respectively, and competitively hybridized onto yeast oligo arrays at 42 degrees celsius for 14 hours in formamide-based hybridization buffer. Microarrays were scanned with an Axonscanner 4200 (Molecular Devices) and analyzed with GenePix Pro 5.1 (Molecular devices) before uploading into Stanford Microarray Database.

2010-12-22 | GSE24004 | GEO

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data