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Transcriptome analysis using RNA sequencing conducted for wild type (Col-0) and ahl10-1 mutant under control conditions and after 96 h at moderate low water potential (-0.7 MPa)

ABSTRACT: RNA sequencing was used to identify genes differentially expressed (DEG) in ahl10-1 mutant compared to Col-0 wild type. Two treatments were analyzed for each genotype: unstressed control and a 96 hour low water potential (-0.7 MPa) treatment. P<0.05 and fold change ≥ 1.25 used as cut off value for DEG. Approximately 2000-3000 genes were found to be significantly up and down-regulated in the wild type stress versus control treatment using . In control treated seedlings, 10 or less than 10 genes are up and down-regulated in ahl10-1 mutant. In the stress treatment, ahl10-1 has 19 and 42 genes that are up and downregulated, respectively.

ORGANISM(S): Arabidopsis thaliana

PROVIDER: GSE112368 | GEO | 2018/07/20

REPOSITORIES: GEO

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