Genomics

Dataset Information

0

AP-1 Regulates Chromatin Accessibility to Promote Sarcomere Disassembly and Cardiomyocyte Protrusion during Zebrafish Heart Regeneration


ABSTRACT: The zebrafish has emerged as a powerful model to study cardiac regeneration; however, the mechanisms by which cardiomyocytes respond to damage by disassembling sarcomeres, proliferating, and repopulating the injured area remain unclear. Here, we show that AP-1 transcription factors play an essential role in regulating the cardiomyocyte response. Using ATAC-Seq, we first find that the cardiomyocyte chromatin accessibility landscape is dynamic following cryoinjury, and that AP-1 motifs are the most highly enriched in regions that gain accessibility during regeneration. Using a cardiomyocyte-specific dominant-negative approach, we show that AP-1 promotes cardiomyocyte proliferation as well as chromatin accessibility at genes regulating sarcomere disassembly and cardiomyocyte protrusion into the injured area. We further find distinct temporal requirements for AP-1 during cardiac regeneration. Altogether, these results indicate that AP-1 plays a key role in the cardiomyocyte response to injury by promoting chromatin accessibility changes, allowing the activation of gene expression programs that support regeneration.

ORGANISM(S): Danio rerio

PROVIDER: GSE130940 | GEO | 2020/06/10

REPOSITORIES: GEO

Dataset's files

Source:
Action DRS
Other
Items per page:
1 - 1 of 1

Similar Datasets

| PRJNA542058 | ENA
2023-06-02 | GSE205115 | GEO
2020-07-13 | PXD016235 | Pride
2020-07-10 | GSE154071 | GEO
2019-09-17 | GSE96929 | GEO
2022-04-05 | GSE164966 | GEO
2021-09-16 | GSE153170 | GEO
2024-03-06 | GSE232060 | GEO
2024-03-06 | GSE232059 | GEO
2024-03-06 | GSE230669 | GEO