Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Transcriptional profiling of Usp22-WT and Usp22-KO pancreatic tumor cells

ABSTRACT: RNA-seq analysis of sorted Usp22-WT and Usp22-KO tumor cells from subcutaneously implanted mouse pancreatic tumors

ORGANISM(S): Mus musculus

PROVIDER: GSE140088 | GEO | 2019/11/08

REPOSITORIES: GEO

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
		Other

Items per page:

1 - 1 of 1

Similar Datasets

Transcriptional profiling of EPHA2-WT and EPHA2-KO pancreatic tumor cells

Project description:RNA-seq analysis of sorted EPHA2-WT and EPHA2-KO tumor cells from subcutaneously implanted mouse pancreatic tumors

2019-08-31 | GSE120208 | GEO

Transcriptional profiling of Usp22-WT and Usp22-KO pancreatic tumor cells

Project description:Transcriptional profiling of Usp22-WT and Usp22-KO pancreatic tumor cells

| PRJNA588235 | ENA

Transcriptional profiling of mouse pancreatic tumor cells II

Project description:RNA-seq analysis of sorted WT and Kdm3a-KO 6419c5 and 6694c2 mouse pancreatic tumor cells from subcutaneously implanted mouse pancreatic tumors

2020-09-10 | GSE146833 | GEO

Transcriptional profiling of mouse pancreatic tumor cells I

Project description:RNA-seq analysis of sorted WT and Klf5/Smad4/Egfr-KO 6694c2 mouse pancreatic tumor cells from subcutaneously implanted mouse pancreatic tumors

2020-09-10 | GSE146832 | GEO

Transcriptional profiling of mouse pancreatic tumor cells III

Project description:RNA-seq analysis of sorted 6419c5 mouse pancreatic tumor cells from subcutaneously implanted mouse pancreatic tumors with or without treatment of a combination immunotherapy

2020-09-10 | GSE146834 | GEO

Epigenetic profiling of sorted tumor cells from implanted T cell low and T cell high mouse pancreatic tumors

Project description:Purpose: Use ATAC-seq strategy to characterize the differentially openned chromatin region in T cell low and high mouse pancreatic tumors in order to identify factors contributing to the differential abundance of tumor infiltrating T cells. Methods: Subcutaneously implanted T cell low and high pancreatic tumors were utilized for the preparation of ATAC-seq libraries from sorted tumor cells.

2018-04-30 | GSE109935 | GEO

Transcriptional profiling of sorted tumor cells from implanted T cell low and T cell high mouse pancreatic tumors

Project description:Purpose: Use RNA-seq strategy to characterize the differentially expressed genes in T cell low and high mouse pancreatic tumors in order to identify factors contributing to the differential abundance of tumor infiltrating T cells. Methods: Subcutaneously implanted T cell low and high pancreatic tumors were utilized for the preparation of RNA-seq libraries from sorted tumor cells.

2018-04-30 | GSE109933 | GEO

RNA-seq analysis of gene expression profile in PTEN WT and KO LN229 glioblastoma multiforme (GBM) Xenograft tumor Transcriptomes

Project description:The goal of this study is to compare gene expression profiles of PTEN WT and KO GBM cells when they are growing in vivo. Isogenic PTEN WT or KO LN229 GBM cells were subcutaneously implanted into Balb/c nude mice (two in each group) to form tumor. At the 30th day tumors were harvested and total RNA was isolated. RNA-seq analysis was performed to examine the differential express pattern of the two type of xenografts.

2019-09-04 | GSE136738 | GEO

TMT-proteomics of sorted MC38+ tumor cells with high-fat diet

Project description:Obesity is a major cancer risk factor, but the underlying molecular mechanisms are not always known. In this study, we look at proteome remodeling in cancer cells with obesity, comparing tumor cells sorted from mice fed high-fat versus control diet. We conducted 10-plex TMT-proteomics on GFP+ MC38 colorectal adenocarcinoma tumor cells, sorted from subcutaneously implanted tumors 12 days after implantation. This study reveals molecular pathways that change in cancer cells with obesity that promote tumor growth.

2020-12-16 | PXD019495 | Pride

Transcriptional profiling of bulk tumor samples from implanted T cell low and T cell high mouse pancreatic tumors

2018-04-30 | GSE109971 | GEO