Transcriptomics

Dataset Information

0

Contribution of brain pericytes in blood-brain barrier formation and maintenance: A transcriptomic study of cocultured human endothelial cells derived from hematopoietic stem cells


ABSTRACT: The formation, maintenance, and repair of the blood-brain barrier (BBB) are critical for central nervous system homeostasis. The interaction of endothelial cells with brain pericytes is known to induce BBB characteristics in brain endothelial cells during embryogenesis and could be used to differentiate human endothelial cells from stem cell source in in vitro BBB models. However, the molecular events involved in BBB maturation are not fully understood. To this end, human endothelial cells derived from hematopoietic stem cells were cultivated with either primary bovine or cell line-derived human brain pericytes to induce BBB formation. Subsequently, the transcriptomic profiles of solocultured vs. cocultured endothelial cells were analyzed over time by the Massive Analysis of cDNA Ends (MACE) technology. This RNA sequencing method is a 3’-end targeted, tag-based, reduced representation transcriptome profiling technique that can reliably quantify all polyadenylated transcripts including those with low expression. By analyzing the generated transcriptomic profiles, we can explore the molecular processes responsible for the functional changes observed in endothelial cells in coculture with brain pericytes (e.g. barrier tightening, changes in the expression of transporters and receptors). Our results identified several up- and downregulated genes and signaling pathways that provide a valuable data source to further delineate complex molecular processes that are involved in BBB formation and BBB maintenance. In addition, this data provides a source to identify novel targets for central nervous system drug delivery strategies.

ORGANISM(S): Homo sapiens

PROVIDER: GSE144474 | GEO | 2020/08/05

REPOSITORIES: GEO

Dataset's files

Source:
Action DRS
Other
Items per page:
1 - 1 of 1

Similar Datasets

2010-10-21 | E-GEOD-15892 | biostudies-arrayexpress
2013-10-18 | E-GEOD-45171 | biostudies-arrayexpress
2010-10-21 | GSE15892 | GEO
2013-10-18 | GSE45171 | GEO
2022-08-01 | GSE202485 | GEO
2012-02-15 | E-GEOD-35802 | biostudies-arrayexpress
2024-02-22 | GSE211099 | GEO
2024-10-16 | GSE273880 | GEO
2011-06-14 | E-GEOD-29932 | biostudies-arrayexpress
2018-11-07 | PXD009197 | Pride