Transcriptomics

Dataset Information

0

Enhancer profiling of glioblastoma uncovers core oncogenic dependency and therapeutic opportunity [RNA-seq]


ABSTRACT: Here, by mapping H3K27ac deposition, we analyze the active regulatory landscapes across primary GBM biopsies, normal brain tissues, and cell line counterparts. Analysis of differentially regulated enhancers, especially super-enhancers between GBM and normal brain tissues, as well as among GBM samples with matched RNA-sequencing data, uncovered unrecognized layers of oncogenic core transcriptional dependency and inter-tumor heterogeneity. Moreover, we demonstrate the functional relevance of leading candidates of super-enhancer-driven transcriptional factors, long non-coding RNAs, and druggable targets in GBM. Through profiling of transcriptional enhancers, our integrative study provides clinically relevant insights into GBM molecular classification, pathogenesis, and therapeutic innovations.

ORGANISM(S): Homo sapiens

PROVIDER: GSE145645 | GEO | 2021/05/05

REPOSITORIES: GEO

Dataset's files

Source:
Action DRS
Other
Items per page:
1 - 1 of 1

Similar Datasets

2021-05-05 | GSE145644 | GEO
| phs001646 | dbGaP
2023-12-06 | MSV000093581 | MassIVE
| PRJNA661159 | ENA
2019-05-06 | PXD013546 | Pride
2014-09-26 | E-GEOD-61710 | biostudies-arrayexpress
2024-01-10 | GSE222421 | GEO
2015-02-04 | GSE65626 | GEO
2016-12-23 | GSE77452 | GEO
2013-09-26 | E-GEOD-51146 | biostudies-arrayexpress