Transcriptomics

Dataset Information

0

SmORFer: a modular algorithm to detect small ORFs in prokaryotes


ABSTRACT: We developed a novel algorithm, smORFer, detecting smORFs (e.g. <50 codons) which performs with higher accuracy in prokaryotic organisms. smORFer considers structural features of genetic sequence along with in-register translation and using Fourier transform converts them into a measurable score to faithfully select smORFs. The algorithm is executed in a modular way and dependent on the data available different modules can be tested.

ORGANISM(S): Staphylococcus aureus

PROVIDER: GSE150601 | GEO | 2021/05/12

REPOSITORIES: GEO

Dataset's files

Source:
Action DRS
Other
Items per page:
1 - 1 of 1

Similar Datasets

| PRJNA632889 | ENA
| S-EPMC8421149 | biostudies-literature
| PRJEB29576 | ENA
2008-03-12 | GSE10511 | GEO
2008-03-11 | E-GEOD-10511 | biostudies-arrayexpress
2015-03-03 | PXD001611 | Pride
2022-12-13 | GSE197909 | GEO
2022-12-13 | GSE198107 | GEO
2024-01-26 | PXD038899 | Pride
| PRJNA575757 | ENA