Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Next Generation Sequencing Facilitates Quantitative Analysis of wild-type (WT) and ERF4 tansgenic plants (OE) Transcriptomes

ABSTRACT: Analysis of gene expression level. The hypothesis tested in the present study was that ERF4 overexpression affects cell cycle-related genes expression which promotes endoreduplication in Arabidopsis.

ORGANISM(S): Arabidopsis thaliana

PROVIDER: GSE182115 | GEO | 2022/12/21

REPOSITORIES: GEO

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
		Other

Items per page:

1 - 1 of 1

Similar Datasets

Next Generation Sequencing Facilitates Quantitative Analysis of WT and o11 mutant Transcriptomes

Project description:Analysis of gene expression level. The hypothesis tested in the present study was that o11 mutant affects nutrient metabolism and stress response.

2018-04-09 | GSE97422 | GEO

Next Generation Sequencing Facilitates Quantitative Analysis of WT and zmbzip22 mutant Transcriptomes

Project description:Analysis of gene expression level. The hypothesis tested in the present study was that zmbzip22 mutant affects nutrient metabolism and stress response.

2018-10-12 | GSE113048 | GEO

Next Generation Sequencing Facilitates Quantitative Analysis of WT and dek15 mutant Transcriptomes

Project description:Analysis of gene expression level. The hypothesis tested in the present study was that dek15 mutant affects nutrient metabolism and cell cycle.

2019-04-09 | GSE120674 | GEO

Next Generation Sequencing Facilitates Quantitative Analysis of WT and dek42 mutant Transcriptomes

Project description:Analysis of gene expression level. The hypothesis tested in the present study was that dek42 mutant affects starch metabolism and pre-mRNA splicing.

2019-04-09 | GSE118498 | GEO

Next Generation Sequencing Facilitates Quantitative Analysis of WT and HY5 mutant Transcriptomes

Project description:Analysis of gene expression level. The hypothesis tested in the present study was that hy5 mutant affects multiple genes expression which regulated by COR27 and COR28

2020-07-15 | GSE154416 | GEO

Next Generation Sequencing Facilitates Quantitative Analysis of WT,cop1 and cor27cor28 mutant Transcriptomes

Project description:Analysis of gene expression level. The hypothesis tested in the present study was that cor27cor28 mutant affects multiple genes expression which regulated by COP1

2020-07-15 | GSE154409 | GEO

Next Generation Sequencing Facilitates Quantitative Analysis of ZH11 and OsNF-YB1 RNAi plants Transcriptomes

Project description:Analysis of gene expression level. The hypothesis tested in the present study was that OsNF-YB1 is specifically expressed in aleurone layer of developing endosperm and suppressed expression of OsNF-YB1 results in a reduced grain-filling rate and small grains. Of the down-regulated genes, the enrichment of transmembrane transport and ATP biosynthetic process is consistent with the decreased grain-filling rate.

2016-12-16 | GSE72185 | GEO

Next Generation Sequencing Facilitates Quantitative Analysis of Wild Type (WT) and dek41 Transcriptomes

Project description:Analysis of gene expression level. The hypothesis tested in the present study was that dek41 mutation affects cis-splicing of nad4 intron 3 in mitochondria in mutant kernels. Results provide important information of the gene expression level of mitochondrial membrane and metabolic process pathway associated genes.

2019-04-30 | GSE117091 | GEO

Next Generation Sequencing Facilitates Quantitative Analysis of Wild Type and fl4 mutant Transcriptomes

Project description:Analysis of gene expression level. The hypothesis tested in the present study was that fl4 mutant influence the ER stress pathway. Results provide important information of the gene expression level regulation of different ER stress pathways and apoptosis Endosperm mRNA profiles of 19DAP wild type (WT) and fl4 mutant were generated by deep sequencing, in triplicate, using Illumina Hiseq 2000 (Zea mays).

2014-01-18 | E-GEOD-54184 | biostudies-arrayexpress

Next Generation Sequencing Facilitates Quantitative Analysis of Wild Type and opaque2 mutant Transcriptomes

Project description:Analysis of gene expression level. The hypothesis tested in the present study was that opaque2 mutant influence the expression of storage proteins. Results provide important information of the gene expression level regulation of storage proteins and other biological processes. Endosperm mRNA profiles of 15DAP wild type (WT) and opaque2 mutant were generated by deep sequencing, in triplicate, using Illumina Hiseq 2500 (Zea mays).

2014-10-15 | E-GEOD-61830 | biostudies-arrayexpress

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data