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SmORF atlas (part 1-RiboSeq)

ABSTRACT: Small open reading frames (smORFs) can have important regulatory roles and give rise to stable proteins, yet their discovery based on sequence-based predictions and proteomics has been challenging. Ribosome profiling (Ribo-seq) data can provide valuable experimental evidence of RNA translation. Stringent analysis of P-sites, representing 1.3 billion high-confidence ribosome locations, revealed 5308 uORFs, 1652 smORFs in lincRNAs and 807 dORFs that are translated in humans. We here provide a comprehensive database of Ribo-seq smORFs for a more complete understanding of the translated human genome.

ORGANISM(S): Homo sapiens

PROVIDER: GSE182371 | GEO | 2022/07/18

REPOSITORIES: GEO

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smORF atlas (part 2-RNASeq)

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