Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Gene expression in secondary lymphoid organ stromal cell populations of Cxcr4WHIM/+ mice [SLO]

ABSTRACT: This study provides gene expression profiles of spleen and peripheral lymph node stromal cell subsets from a CXCR4 gain-of- function mouse model of WHIM syndrome at the population level.

ORGANISM(S): Mus musculus

PROVIDER: GSE189938 | GEO | 2021/12/04

REPOSITORIES: GEO

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
		Other

Items per page:

1 - 1 of 1

Similar Datasets

Expression data from a new lymphoid stromal population

Project description:Lymph node (LN) stromal cells provide survival signals and adhesive substrata to lymphocytes. During an immune response, B cell follicles enlarge, questioning how LN stromal cells manage these cellular demands. Herein, we used a murine fate mapping system to describe a new stromal cell type that resides in the T cell zone of resting LNs. We used microarrays to detail the global programme of gene expression characterizing this new population of lymphoid stromal cells. Mice lymph nodes were collected and digested before cell sorting and RNA extraction and hybridization on Affymetrix microarrays. We sought to obtain homogeneous populations of lymphoid stromal cells in order to increase expression profiles.

2013-12-31 | E-GEOD-47906 | biostudies-arrayexpress

Expression data from a new lymphoid stromal population

2013-12-31 | GSE47906 | GEO

Gene expression in secondary lymphoid organ stromal cell populations of Cxcr4WHIM/+ mice [SLO]

Project description:Gene expression in secondary lymphoid organ stromal cell populations of Cxcr4WHIM/+ mice [SLO]

| PRJNA785161 | ENA

Low input RNA transcriptomic analysis of spleen and lymph node Fibroblastic Reticular Cells (FRCs) in a murine model of Diffuse Large B-cell Lymphoma (DLBCL)

Project description:Purpose: analyze the transcriptomic changes occurring in spleen (SP) and lymph node (LN) stromal cells in a murine model of DLBCL. Purpose: analyze the transcriptomic changes occurring in FRCs in DLBCL

2023-06-16 | GSE179193 | GEO

Transcription profiling of human follicular lymphoma and normal lymphoid tissue comparisons

2005-10-05 | E-SMDB-1845 | biostudies-arrayexpress

scRNA-seq of mouse lymph node stromal cells

Project description:scRNA-seq of mouse lymph node stromal cells

| PRJNA834128 | ENA

Follicular lymphoma and normal lymphoid tissue comparisons

Project description:20 FL lymph node samples from 16 patients and four normal lymphoid tissues (two tonsil and two spleen) from four different patient. Data can be viewed on the supplemental website at http://genome-www.stanford.edu/rituximab/. Set of arrays organized by shared biological context, such as organism, tumors types, processes, etc. Using regression correlation

2005-11-22 | E-GEOD-3646 | biostudies-arrayexpress

Spleen vs SLC (Secondary lymphoid-organ chemokine) Treated B cell

Project description:total RNA from mouse (male c57BL/6) spleen labeled with Cy3 vs total RNA from mouse (male c57BL/6) B cells treated with SLC (Secondary lymphoid-organ chemokine) labeled with Cy5- time course with repeats Keywords: ordered

2003-04-14 | GSE398 | GEO

Follicular lymphoma and normal lymphoid tissue comparisons

2005-11-23 | GSE3646 | GEO

Expression profile of stromal cells in the lymph node

Project description:Tissue structure of the lymph node (LN) is supported by the network of stromal cells of mesenchymal origin, which is suggested to contribute to various immunological processes. In order to identify stromal cell–derived factors that regulate immune function, we performed gene expression profiling of stromal cells freshly isolated from collagenase digested mouse LNs, cultured stromal cell lines, and embryonic fibroblasts as a mesenchymal control.

2014-06-19 | GSE55251 | GEO

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data