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ATAC-seq deconvolution with CiberATAC identifies a prognostic regulon of HMG20B in metastatic colorectal adenocarcinoma

ABSTRACT: We used a sequential metastasis model of colorectal cancer cell lines and tumours to understand epigenomic regulators of metastasis. We performed scRNA-seq, scATAC-seq, and bulk ATAC-seq on these samples and discovered the deregulation of HMG20B and its regulon.

ORGANISM(S): Homo sapiens

PROVIDER: GSE196515 | GEO | 2023/02/01

REPOSITORIES: GEO

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