Transcriptomics

Dataset Information

0

Transcription factor RUNX3 mediates plasticity of ThGM cells toward Th1 phenotype.


ABSTRACT: GM-CSF-producing T helper (Th) cells play a crucial role in the pathogenesis of autoimmune diseases such as multiple sclerosis (MS). Recent studies have identified a distinct population of GM-CSF-producing Th cells, named ThGM cells, that also express cytokines TNF, IL-2, and IL-3, but lack expression of master transcription factors (TF) and signature cytokines of commonly recognized Th cell lineages. ThGM cells are highly encephalitogenic in a mouse model of MS, experimental autoimmune encephalomyelitis (EAE). Similar to Th17 cells, in response to IL-12, ThGM cells upregulate expression of T-bet and IFN-g and switch their phenotype to Th1. Here we show that in addition to T-bet, TF RUNX3 also contributes to the Th1 switch of ThGM cells. T-bet-deficient ThGM cells in the CNS of mice with EAE had low expression of RUNX3, and knockdown of RUNX3 expression in ThGM cells abrogated the Th1-inducing effect of IL-12. Comparison of ThGM and Th1 cell transcriptomes showed that ThGM cells expressed a set of TFs known to inhibit the development of other Th lineages. Lack of expression of lineage-specific cytokines and TFs by ThGM cells, together with expression of TFs that inhibit the development of other Th lineages, suggests that ThGM cells are a non-polarized subset of Th cells with lineage characteristics.

ORGANISM(S): Mus musculus Homo sapiens

PROVIDER: GSE205763 | GEO | 2022/07/27

REPOSITORIES: GEO

Dataset's files

Source:
Action DRS
Other
Items per page:
1 - 1 of 1

Similar Datasets

2024-09-02 | BIOMD0000000215 | BioModels
2020-09-15 | GSE150132 | GEO
2022-08-05 | GSE200250 | GEO
2011-04-24 | E-GEOD-27158 | biostudies-arrayexpress
2011-12-27 | E-GEOD-33802 | biostudies-arrayexpress
2019-02-14 | PXD004532 | Pride
2022-02-03 | GSE172358 | GEO
2011-04-24 | GSE27158 | GEO
2023-11-01 | GSE234705 | GEO
2012-10-04 | E-GEOD-38808 | biostudies-arrayexpress