Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Campylobacter jejuni interactions with Acanthamoeba castellanii

ABSTRACT: To investigate the interaction of intra-amoebal C. jejuni with the transient host A. castellanii. We then performed gene expression profiling analysis using data obtained from RNA-seq of control and intra-amoebal C. jejuni.

ORGANISM(S): Acanthamoeba castellanii Campylobacter jejuni

PROVIDER: GSE206909 | GEO | 2022/11/02

REPOSITORIES: GEO

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
		Other

Items per page:

1 - 1 of 1

Similar Datasets

Campylobacter jejuni interactions with Acanthamoeba castellanii

Project description:Campylobacter jejuni interactions with Acanthamoeba castellanii

| PRJNA852590 | ENA

Acanthamoeba castellanii as a model for unveiling Campylobacter jejuni host-pathogen dynamics

Project description:The persistence of Campylobacter jejuni in the natural environment, despite its microaerophilic nature, continues to be a subject of active investigation. Its survival and persistence likely stem from a combination of factors, including interactions with amoebae. C. jejuni transiently interacts with Acanthamoebae and this is thought to provide protection against unfavourable conditions and prime the bacteria for interactions with warm-blooded hosts. Acanthamoebae play vital roles in ecosystems by preying on microorganisms and establishing ecological niches with various bacterial species, some of which are clinically important pathogens. To gain a better understanding on the role of Acanthamoebae in the persistence of C. jejuni in the natural environment, we examined their interactions at the molecular level.

2024-06-28 | GSE262802 | GEO

Acanthamoeba castellanii

Project description:Acanthamoeba castellanii Genome sequencing

| PRJNA772372 | ENA

Acanthamoeba castellanii

Project description:Acanthamoeba castellanii Raw sequence reads

| PRJNA422304 | ENA

Acanthamoeba castellanii

Project description:RNAseq data from Acanthamoeba castellanii

| PRJNA794325 | ENA

Acanthamoeba castellanii

Project description:Acanthamoeba castellanii Transcriptome or Gene expression

| PRJNA1195399 | ENA

Acanthamoeba castellanii as a model for unveiling Campylobacter jejuni host-pathogen dynamics

Project description:Acanthamoeba castellanii as a model for unveiling Campylobacter jejuni host-pathogen dynamics

| PRJNA1093403 | ENA

Gene expression of Acanthamoeba castellanii under long-term co-culture condition

Project description:The gene expression of A. castellanii cultured with low-nutrient medium and heat-killed bacteria for 21 days. The RNA-seq analysis was performed by Illumina HiSeq platform. The treated A. castellanii was compared with amoeba cultured in growth medium.

2023-03-10 | GSE227112 | GEO

Acanthamoeba castellanii strain:Neff

Project description:Acanthamoeba castellanii

| PRJNA20303 | ENA

Legionella pneumophila infection rewires the Acanthamoeba castellanii transcriptome, highlighting a class of sirtuin genes

Project description:Through RNA-sequencing we compared A. castellanii infected with wild type L. pneumophila to A. castellanii infected with an isogenic dotA mutant strain, which is unable to replicate intracellularly. We identified clear morphological and transcriptional changes in A. castellanii over the course of infection. Genes differentially expressed during infection fell into fundamental biological processes, such as small GTPase signalling, cytoskeleton dynamics, metabolism and cell proliferation. Members of the Sirtuin family of class III histone deacetylases were upregulated by A. castellanii throughout wild type L. pneumophila infection. sir6f expression was important for A. castellanii proliferation during infection and L. pneumophila replication

2020-07-11 | GSE154179 | GEO

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data