Transcriptomics

Dataset Information

0

Development and heat stress-induced transcriptomic changes during embryogenesis of the coral Acropora palmata


ABSTRACT: Projected elevation of seawater temperatures poses a threat to the reproductive success of Caribbean reef-building corals that have planktonic development during the warmest months of the year. This study examined the transcriptomic changes that occurred during embryonic and larval development of the elkhorn coral, Acropora palmata, at a non-stressful temperature (28°C) and further assessed the effects of two elevated temperatures (30°C and 31.5°C) on these expression patterns. Using cDNA microarrays, we compared expression levels of 2,051 genes from early embryos and larvae at multiple developmental stages (including pre-blastula, blastula, gastrula, and planula stages) at each of the three temperatures. At 12 hours post-fertilization in 28°C treatments, genes involved in cell replication/cell division and transcription were up-regulated in A. palmata embryos, followed by a reduction in expression of these genes during later growth stages. From 24.5 to 131 hours post-fertilization at 28°C, A. palmata altered its transcriptome by up-regulating genes involved in protein synthesis and metabolism. Temperatures of 30°C and 31.5°C caused major changes to the A. palmata embryonic transcriptomes, particularly in the samples from 24.5 hpf post-fertilization, characterized by down-regulation of numerous genes involved in cell replication/cell division, metabolism, cytoskeleton, and transcription, while heat shock genes were up-regulated compared to 28°C treatments. These results suggest that increased temperature may cause a breakdown in proper gene expression during development in A. palmata by down-regulation of genes involved in essential cellular processes, which may lead to the abnormal development and reduced survivorship documented in other studies.

ORGANISM(S): Acropora palmata

PROVIDER: GSE21038 | GEO | 2010/03/25

SECONDARY ACCESSION(S): PRJNA126461

REPOSITORIES: GEO

Dataset's files

Source:
Action DRS
Other
Items per page:
1 - 1 of 1

Similar Datasets

2010-06-05 | E-GEOD-21038 | biostudies-arrayexpress
2012-07-06 | GSE33236 | GEO
2016-06-07 | E-MTAB-4831 | biostudies-arrayexpress
2017-02-09 | GSE77895 | GEO
2013-11-12 | E-GEOD-43652 | biostudies-arrayexpress
2013-11-12 | GSE43652 | GEO
2019-08-14 | GSE135780 | GEO
2007-01-26 | GSE1887 | GEO
2015-09-05 | GSE30779 | GEO
2014-06-23 | GSE30778 | GEO