Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Protoplast data: suberized exodermis is required for tomato drought tolerance

ABSTRACT: This experiment aimed to identify protoplast-induced genes in tomato seedling, for future use in single cell datasets.

ORGANISM(S): Solanum lycopersicum

PROVIDER: GSE212404 | GEO | 2023/10/01

REPOSITORIES: GEO

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
		Other

Items per page:

1 - 1 of 1

Similar Datasets

Single cell data: suberized exodermis is required for tomato drought tolerance

Project description:Single cell datasets of tomato (Solanum lycopersicum) seedling roots grown in MS plates.

2023-10-01 | GSE212403 | GEO

Protoplast data: suberized exodermis is required for tomato drought tolerance

Project description:Protoplast data: suberized exodermis is required for tomato drought tolerance

| PRJNA875392 | ENA

Suberized exodermis is required for tomato drought tolerance

Project description:Suberized exodermis is required for tomato drought tolerance

| PRJNA875389 | ENA

Tomato Proteogenomics

Project description:Proteins were extracted from tomato seedling (Heinz 1706) grown under 16-hour light/8-hour dark at 22 C for 4 days. Root consisted of ~3 cm from the tip and shoot consisted of cotyledons, meristems and ~1 cm hypocotyl. Proteins were then digested with either Trypsin/LysC or GluC, independently.

2019-01-25 | MSV000083363 | MassIVE

A suberized exodermis is required for tomato drought tolerance.

Project description:Plant roots integrate environmental signals with development using exquisite spatiotemporal control. This is apparent in the deposition of suberin, an apoplastic diffusion barrier, which regulates flow of water, solutes and gases, and is environmentally plastic. Suberin is considered a hallmark of endodermal differentiation but is absent in the tomato endodermis. Instead, suberin is present in the exodermis, a cell type that is absent in the model organism Arabidopsis thaliana. Here we demonstrate that the suberin regulatory network has the same parts driving suberin production in the tomato exodermis and the Arabidopsis endodermis. Despite this co-option of network components, the network has undergone rewiring to drive distinct spatial expression and with distinct contributions of specific genes. Functional genetic analyses of the tomato MYB92 transcription factor and ASFT enzyme demonstrate the importance of exodermal suberin for a plant water-deficit response and that the exodermal barrier serves an equivalent function to that of the endodermis and can act in its place.

| S-EPMC10808073 | biostudies-literature

Suberized exodermis is required for tomato drought tolerance

Project description:This SuperSeries is composed of the SubSeries listed below.

2023-10-01 | GSE212405 | GEO

Single cell data: suberized exodermis is required for tomato drought tolerance

Project description:Single cell data: suberized exodermis is required for tomato drought tolerance

| PRJNA875390 | ENA

The tomato SlDREB2 transcription factor improves salt stress tolerance in tomato

Project description:The tomato SlDREB2 transcription factor was overexpressed in cultivated tomato (Solanum lycopersicum) and transgenic plants tolerance to salinity was compared to that of wild-type plants.

2015-06-01 | GSE64010 | GEO

4plex_tomato_2013_03: Effect of drought stress on the transcriptome of tomato leaves

Project description:4plex_tomato_2013_03 - 4plex_tomato_2013_03 - What are the genes implied in drought resistance in tomato ? - 2 strains of tomato (Cervil, a cherry tomato, and Levovil, an large fruited tomato) were cultivated under normal hydric conditions and drought stress. Young leaves were gathered 3 1/2 months after sawing for analysis.

2015-07-01 | GSE69898 | GEO

transcriptome profiling from a protoplast culture of arabidopsis thaliana-From protoplast to plant : transcrip...

Project description:ra03-03_protoplats - transcriptome profiling from a protoplast culture of arabidopsis thaliana - transcriptome profiling and comparison of 6 status of differentiation - protoplasts were extracted from plantlet cultivated during 2 weeks then placed in a culture midium which stimulate cell division. Protoplasts were harvested after 0, 24, 48, 96 or 168 hours of culture. Biological repeat has been done (experiments A and C) Keywords: time course

2007-06-20 | GSE7984 | GEO

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data