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Protoplast data: suberized exodermis is required for tomato drought tolerance

ABSTRACT: Protoplast data: suberized exodermis is required for tomato drought tolerance

PROVIDER: PRJNA875392 | ENA |

REPOSITORIES: ENA

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Dataset's files

Source:

			Action	DRS
	SRR21375712_1.fastq.gz	Fastqsanger.gz
	SRR21375712_2.fastq.gz	Fastqsanger.gz
	SRR21375713_1.fastq.gz	Fastqsanger.gz
	SRR21375713_2.fastq.gz	Fastqsanger.gz
	SRR21375714_1.fastq.gz	Fastqsanger.gz

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Protoplast data: suberized exodermis is required for tomato drought tolerance

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Suberized exodermis is required for tomato drought tolerance

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Single cell data: suberized exodermis is required for tomato drought tolerance

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A suberized exodermis is required for tomato drought tolerance.

Project description:Plant roots integrate environmental signals with development using exquisite spatiotemporal control. This is apparent in the deposition of suberin, an apoplastic diffusion barrier, which regulates flow of water, solutes and gases, and is environmentally plastic. Suberin is considered a hallmark of endodermal differentiation but is absent in the tomato endodermis. Instead, suberin is present in the exodermis, a cell type that is absent in the model organism Arabidopsis thaliana. Here we demonstrate that the suberin regulatory network has the same parts driving suberin production in the tomato exodermis and the Arabidopsis endodermis. Despite this co-option of network components, the network has undergone rewiring to drive distinct spatial expression and with distinct contributions of specific genes. Functional genetic analyses of the tomato MYB92 transcription factor and ASFT enzyme demonstrate the importance of exodermal suberin for a plant water-deficit response and that the exodermal barrier serves an equivalent function to that of the endodermis and can act in its place.

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Suberized exodermis is required for tomato drought tolerance

Project description:This SuperSeries is composed of the SubSeries listed below.

2023-10-01 | GSE212405 | GEO

Gene expression changes in tomato hairy root cultures with pertubations in exodermis-enriched transcription factors.

Project description:This study provides the overall changes in gene expression in tomato hairy root cultures with CRISPR knockouts (ko) or 35Spro-driven overexpression (OX) of exodermis enriched transcription factors. The transcription factors investigated in this study are: SlMYB41 (Solyc02g079280.3.1), SlMYB92 (Solyc05g051550.2.1) and SlWRKY71 (Solyc02g071130.3.1).

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4plex_tomato_2013_03: Effect of drought stress on the transcriptome of tomato leaves

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4plex_tomato_2013_03: Effect of drought stress on the transcriptome of tomato leaves

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