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A subset of temporary resident cardiac macrophages induced by myocardial infarction limits adverse ventricular remodeling [scRNA-seq]

ABSTRACT: We provided a single cell mRNA-seq analyses of mouse macrophage heterogeneity in the heart after MI.

ORGANISM(S): Mus musculus

PROVIDER: GSE216211 | GEO | 2023/10/20

REPOSITORIES: GEO

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A subset of temporary resident cardiac macrophages induced by Myocardial infarction limits adverse ventricular remodeling

Project description:We provided an mRNA-seq analysis of mouse macrophage heterogeneity in the heart after MI.

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Project description:We provided an analysis of mouse macrophage heterogeneity in the heart after MI using spatial transcriptome sequencing.

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A subset of temporary resident cardiac macrophages induced by myocardial infarction limits adverse ventricular remodeling

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A subset of temporary resident cardiac macrophages induced by myocardial infarction limits adverse ventricular remodeling

Project description:A subset of temporary resident cardiac macrophages induced by myocardial infarction limits adverse ventricular remodeling

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A subset of temporary resident cardiac macrophages induced by Myocardial infarction limits adverse ventricular remodeling

Project description:A subset of temporary resident cardiac macrophages induced by Myocardial infarction limits adverse ventricular remodeling

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A subset of temporary resident cardiac macrophages induced by myocardial infarction limits adverse ventricular remodeling [scRNA-seq]

Project description:A subset of temporary resident cardiac macrophages induced by myocardial infarction limits adverse ventricular remodeling [scRNA-seq]

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A subset of temporary resident cardiac macrophages induced by myocardial infarction limits adverse ventricular remodeling [spatial RNA-seq]

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Plasma circulating extracellular RNAs in left ventricular remodeling post-myocardial infarction

Project description:Despite substantial declines in mortality following myocardial infarction (MI), subsequent left ventricular remodelling (LVRm) remains a significant long-term complication. Extracellular small non-coding RNAs (exRNAs) have been associated with cardiac inflammation and fibrosis and we hypothesized that they are associated with post-MI LVRm phenotypes. RNA sequencing of exRNAs was performed on plasma samples from patients with “beneficial” (decrease LVESVI ≥20%, n=11) and “adverse” (increase LVESVI ≥15%, n=11) LVRm. Selected differentially expressed exRNAs were validated by RT-qPCR (n=331) and analyzed for their association with LVRm determined by cardiac MRI. Principal components of exRNAs were associated with LVRm phenotypes post-MI; specifically, LV mass, LV ejection fraction, LV end systolic volume index, and fibrosis. We then investigated the temporal regulation and cellular origin of exRNAs in murine and cell models and found that: 1) plasma and tissue miRNA expression was temporally regulated; 2) the majority of the miRNAs were increased acutely in tissue and at sub-acute or chronic time-points in plasma; 3) miRNA expression was cell-specific; and 4) cardiomyocytes release a subset of the identified miRNAs packaged in exosomes into culture media in response to hypoxia/reoxygenation. In conclusion, we find that plasma exRNAs are temporally regulated and are associated with measures of post-MI LVRm.

2019-04-01 | GSE112690 | GEO

Self-renewing resident cardiac macrophages limit adverse remodeling following myocardial infarction.

Project description:Macrophages promote both injury and repair after myocardial infarction, but discriminating functions within mixed populations remains challenging. Here we used fate mapping, parabiosis and single-cell transcriptomics to demonstrate that at steady state, TIMD4+LYVE1+MHC-IIloCCR2- resident cardiac macrophages self-renew with negligible blood monocyte input. Monocytes partially replaced resident TIMD4-LYVE1-MHC-IIhiCCR2- macrophages and fully replaced TIMD4-LYVE1-MHC-IIhiCCR2+ macrophages, revealing a hierarchy of monocyte contribution to functionally distinct macrophage subsets. Ischemic injury reduced TIMD4+ and TIMD4- resident macrophage abundance, whereas CCR2+ monocyte-derived macrophages adopted multiple cell fates within infarcted tissue, including those nearly indistinguishable from resident macrophages. Recruited macrophages did not express TIMD4, highlighting the ability of TIMD4 to track a subset of resident macrophages in the absence of fate mapping. Despite this similarity, inducible depletion of resident macrophages using a Cx3cr1-based system led to impaired cardiac function and promoted adverse remodeling primarily within the peri-infarct zone, revealing a nonredundant, cardioprotective role of resident cardiac macrophages.

| S-EPMC6565365 | biostudies-literature

Self-renewing resident cardiac macrophages limit adverse remodeling following myocardial infarction

Project description:Mononuclear phagocytes promote injury and repair following myocardial infarction but discriminating functions within mixed populations remains challenging. We utilized fate mapping and single cell RNA-sequencing to delineate fate specification trajectories of heterogeneous cardiac macrophage subpopulations. In steady state, TIMD4 expression tracked with a dominant resident cardiac macrophage subset that persisted via in situ self-renewal with minimal monocyte input. Following ischemic injury, monocytes displayed significant plasticity, ultimately adopting transcriptional states similar to resident macrophages, but also multiple unique states. Ischemic injury reduced resident macrophage abundance within infarct tissue, and despite transcriptional similarity, TIMD4 expression distinguished resident from recruited macrophages. Specific lineage-based depletion of resident cardiac macrophages resulted in depressed cardiac function and adverse remodeling primarily within the peri-infarct zone, the only region of the myocardium where resident macrophages expanded numerically following injury. Together, these data highlight a non-redundant, cardioprotective role of resident cardiac macrophages, and the diverse transcriptional fates recruited monocytes can adopt.

2018-12-15 | GSE119355 | GEO

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