Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Transcriptome analysis of CARNMT1 knockout cells

ABSTRACT: Examination of transcriptome of CARNMT1 knockout cells by Ribosomal RNA depleted RNA-Seq

ORGANISM(S): Homo sapiens

PROVIDER: GSE217990 | GEO | 2023/09/06

REPOSITORIES: GEO

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
		Other

Items per page:

1 - 1 of 1

Similar Datasets

Transcriptome analysis of SFP45 knockdown cells

Project description:Examination of transcriptome of SPF45 knockdown cells by Ribosomal RNA depleted RNA-Seq

2020-07-30 | GSE135128 | GEO

Transcriptome analysis of SAP30BP knockdown cells

Project description:Examination of transcriptome of SAP30BP knockdown cells by Ribosomal RNA depleted RNA-Seq

2023-12-03 | GSE220906 | GEO

PD-1 Knockout Engineered T Cells for Advanced Colorectal Cancer with MSI high expression

Project description:Interventions: experimental group :PD-1 Knockout Engineered T Cells Primary outcome(s): Number of participants with Adverse Events and/or Dose Limiting Toxicities as a Measure of Safety and tolerability of dose of PD-1 Knockout T cells using Common Terminology Criteria for Adverse Events (CTCAE v4.0) in patients Study Design: historical control

| 2662961 | ecrin-mdr-crc

Transcriptome analysis of CARNMT1 knockout cells

Project description:Transcriptome analysis of CARNMT1 knockout cells

| PRJNA901866 | ENA

Effect of FAM50 knockout on the transcriptome

Project description:A knockout clone has been generated for both FAM50A and FAM50B; knockout of the other gene is then performed and the transcriptome is analysed to look at the effect of dual gene loss.

| EGAS00001004836 | EGA

Transcriptome analysis by RNA sequencing of human trisomy 21 and normal control blood cells

Project description:The aim of this study is to analyse trisomy 21 (T21) transcriptome. We generated RNA sequencing (RNA-Seq) paired-end data from ribosomal RNA-depleted total RNA isolated from blood cell samples of four T21 and four normal control individuals.

2021-05-04 | GSE151282 | GEO

Analysis of differences in the transcriptome of WAT from Wildtype and 14-3-3zeta knockout mice

Project description:Due to inherent differences in adipcoyte size between wildtype and knockout animals, we sought to examine if the decrease in adipocyte size was due to differences in the transcriptome and more specifcially, adipogenic genes. Examination of the transcriptome in wildtype (WT) and knockout (KO) gonadal white adipose tissue from adult mice

2015-07-23 | E-GEOD-66716 | biostudies-arrayexpress

Transcriptome-wide analysis upon DCP1A knockout

Project description:Transcriptome-wide analysis upon DCP1A knockout

| PRJNA487346 | ENA

Transcriptome analysis of CARNMT1 knockout tissue

Project description:Transcriptome analysis of CARNMT1 knockout tissue

| PRJNA952007 | ENA

Analysis of the transcriptome of undifferentiated SH-SY5Y neuroblastoma cells following AS3MT knockout with CRISPR/Cas9.

Project description:Aims/Hypothesis: AS3MT is a risk gene for schizoprhenia and the role in neuronal cell lines has not been established. Using CRISPR/Cas9 generated two AS3MT knockout lines (B6/C6) and age matched wild type controls (D2/D3) in SH-SY5Y neuroblastoma cells and characterised the transcriptional response following knockout. We carried out two independent sequencing runs, including independent cell culturing, RNA extraction, library prep, and sequencing and identify considerable overlap of differentially expressed genes identifying a robust transcriptional response following AS3MT knockout. We identified a number of genes involved in cellular adhesions, ribosomal function, cell-cell contact, and neuronal development, as well as a significant enrichment of previously associated schizophrenia genes, including ZNF80a and DRD2.

2021-10-04 | GSE182157 | GEO

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data