Transcriptomics

Dataset Information

0

Dynamic Changes in Lymphocyte Populations Establish Zebrafish as a Thymic Involution Model


ABSTRACT: The thymus is the site of T lymphocyte development and T cell education to recognize foreign, but not self, antigens. B cells also reside and develop in the thymus, although their function(s) are less clear. During ‘thymic involution,’ a process of lymphoid atrophy and adipose replacement linked to sexual maturation, thymic cells decline. However, thymic B cells decrease far less than T cells, such that B cells comprise ~1% of neonatal thymocytes, but up to ~10% in adulthood in humans. All jawed vertebrates possess a thymus, and we and others have shown that zebrafish (Danio rerio) also have thymic B cells. Here, we investigated the precise identities of zebrafish thymic T and B cells and how they change with involution. We assessed the timing and specific details of zebrafish thymic involution using multiple lymphocyte-specific, fluorophore-labeled transgenic lines, quantifying changes in thymic lymphocytes pre- vs. post-involution. Our results prove that, as in humans, zebrafish thymic B cells increase relative to T cells post-involution. We also performed RNA sequencing (RNA-seq) on D. rerio thymic and marrow lymphocytes of four novel double-transgenic lines, identifying distinct populations of immature T and B cells. Collectively, this is the first comprehensive analysis of zebrafish thymic involution, demonstrating its similarity to human involution, and establishing the highly genetically-manipulatable zebrafish model as a template for involution studies.

ORGANISM(S): Danio rerio

PROVIDER: GSE237139 | GEO | 2024/04/02

REPOSITORIES: GEO

Dataset's files

Source:
Action DRS
Other
Items per page:
1 - 1 of 1

Similar Datasets

2024-12-18 | GSE237417 | GEO
2019-10-09 | GSE133341 | GEO
2022-09-30 | GSE210885 | GEO
2008-12-31 | GSE10168 | GEO
2008-12-30 | E-GEOD-10168 | biostudies-arrayexpress
2008-11-25 | E-GEOD-10166 | biostudies-arrayexpress
| PRJNA994052 | ENA
2024-08-18 | GSE269843 | GEO
2024-01-11 | GSE244219 | GEO
2019-06-06 | GSE132278 | GEO