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Expression data from Pseudomonas putida KT2440 (Progenika oligo array data)

ABSTRACT: We used Progenika oligonucleotide arrays to monitore the gene expression of P. putida after a cold shock from 30°C to 10°C

ORGANISM(S): Pseudomonas putida KT2440

PROVIDER: GSE24174 | GEO | 2011/03/25

SECONDARY ACCESSION(S): PRJNA133711

REPOSITORIES: GEO

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Expression data from Pseudomonas putida KT2440 (Affymetrix data)

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Expression data from Pseudomonas putida KT2440 Tn5 mutants

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Expression data from Pseudomonas putida KT2440 (RNA-Seq data)

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Expression data from Pseudomonas putida KT2440 Tn5 mutants

Project description:We used Progenika oligonucleotide arrays to monitor the gene expression after cold shock from 30Â°C to 10Â°C. The 10Â°C samples of the P. putida wild type were compared to those of the respective P. putida KT2440 Tn5 mutants affected in either cbrA (PP4695), cbrB (PP4696), pcnB (PP4697), vacB (PP4880) or bipA (PP5044). Cultures were grown in minimal medium supplemented with succinate at 30Â°C. In mid-exponential phase, cells were cooled down to 10Â°C. Two hours after the medium had reached 10Â°C, cells were harvested for subsequent RNA extraction.

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