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Chromatin conformation and histone modification profiling across human kidney anatomic regions [Hi-C]

ABSTRACT: Here, we leveraged our recently described high-yield nuclei extraction method and performed Hi-C and Cleavage Under Targets and Release Using Nuclease (CUT&RUN) sequencing of histone modifications (H3K4me3 and H3K27me3) in parallel on the kidney cortex, medulla and papilla samples dissected from the same donor. This site describes the Hi-C data.

ORGANISM(S): Homo sapiens

PROVIDER: GSE253632 | GEO | 2024/06/20

REPOSITORIES: GEO

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Chromatin conformation and histone modification profiling across human kidney anatomic regions [CUT&RUN]

Project description:Here, we leveraged our recently described high-yield nuclei extraction method and performed Hi-C and Cleavage Under Targets and Release Using Nuclease (CUT&RUN) sequencing of histone modifications (H3K4me3 and H3K27me3) in parallel on the kidney cortex, medulla and papilla samples dissected from the same donor. This site describes the CUT&RUN data.

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Chromatin conformation and histone modification profiling across human kidney anatomic regions [Hi-C]

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Chromatin conformation and histone modification profiling across human kidney anatomic regions

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Hi-C of Drosophila embryos to investigate chromatin conformation during dorsal-ventral patterning

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