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Transcription profiling of wild type Basmati 370 and its T-DNA insertional mutant OsAPC6.

ABSTRACT: The aim of this study was to look for the changes at the transcriptome level caused by the insertion of a T-DNA in mutant of Basmati 370 with dwarf phenotype. The comparative analysis of differentially expressed genes was conducted individually and collectively for both.

ORGANISM(S): Oryza sativa Oryza sativa Indica Group

PROVIDER: GSE31200 | GEO | 2013/12/31

SECONDARY ACCESSION(S): PRJNA144741

REPOSITORIES: GEO

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Transcription profiling of wild type Basmati 370 and its T-DNA insertional mutant OsAPC6.

Project description:The aim of this study was to look for the changes at the transcriptome level caused by the insertion of a T-DNA in mutant of Basmati 370 with dwarf phenotype. The comparative analysis of differentially expressed genes was conducted individually and collectively for both. RNA from wild type Basmati 370 and its mutant OsAPC6 grown under optimal conditions were analyzed in two different biological replications (A and B) making total four samples.

2013-12-31 | E-GEOD-31200 | biostudies-arrayexpress

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Transcription profiling of Basmati T-DNA insertional mutant lines

Project description:The aim of this study was to look for the changes at the transcriptome level caused by the same T-DNA cassette in three mutants of Basmati 370 with different phenotypes. The comparative analysis of differentially expressed genes was conducted individually and collectively for all three mutants. RNA from Basmati mutants OsPE, Osoc and Ossl grown under optimal conditions were analyzed in two different biological replications (A and B) making total six samples.

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Building a multipurpose insertional mutant library for forward and reverse genetics in Chlamydomonas.

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