Transcriptomics

Dataset Information

0

Identification of SOX4 novel transcriptional targets.


ABSTRACT: The SOX4 gene belongs to a family of transcription factors and we previously unveiled SOX4 gene amplification and over-expression in a subset of lung cancers, indicating it may constitute a driver oncogene. Here, we searched for SOX4 transcriptional targets and investigate their involvement in lung development and carcinogenesis. We abrogated SOX4 expression in the NIH-H522 lung cancer cell line, carrying SOX4 amplification and over-expression, using an inducible short-hairpin system. Global analysis of gene expression identified about 90 genes down-regulated after SOX4 abrogation many of them related to neural development. We also demonstrated recruitment of SOX4 to many of these promoters, evidencing their nature as direct transcriptional targets of SOX4. Most of these transcripts were significantly increased in lung cancer cells with ectopic SOX4 over-expression and in lung tumors with high levels of SOX4. Conversely, many of them exhibited significant low expression levels in embryonic fibroblasts from Sox4-/- mice.

ORGANISM(S): Homo sapiens

PROVIDER: GSE31612 | GEO | 2011/11/18

SECONDARY ACCESSION(S): PRJNA145595

REPOSITORIES: GEO

Dataset's files

Source:
Action DRS
Other
Items per page:
1 - 1 of 1

Similar Datasets

2011-11-18 | E-GEOD-31612 | biostudies-arrayexpress
2018-08-16 | GSE118572 | GEO
2005-12-01 | GSE2539 | GEO
2008-11-10 | GSE11914 | GEO
2008-11-14 | E-GEOD-11914 | biostudies-arrayexpress
2008-11-10 | GSE11913 | GEO
2021-01-01 | GSE144013 | GEO
2020-01-01 | GSE99256 | GEO
2024-03-31 | GSE261370 | GEO
2006-07-28 | GSE4225 | GEO