Transcriptomics

Dataset Information

0

Genome-wide Transcriptional Responses of the Filamentous Fungus Aspergillus niger to Lignocellulose (Wheat straw) using RNA-sequencing


ABSTRACT: We have studied the physiological response of the fungus Aspergillus niger when exposed to wheat straw as a model lignocellulosic substrate. Using RNA-sequencing we showed that, 24 hours after exposure to straw, gene expression of known plant cell wall degrading enzymes represents a huge investment for the cells (about 20 % of the total mRNA). Our results also uncovered new esterases and surface interacting proteins that might form part of the fungal degradative arsenal. We also show that antisense transcripts are abundant and that their expression can be regulated by conditions.

ORGANISM(S): Aspergillus niger

PROVIDER: GSE33852 | GEO | 2012/08/27

SECONDARY ACCESSION(S): PRJNA148183

REPOSITORIES: GEO

Dataset's files

Source:
Action DRS
Other
Items per page:
1 - 1 of 1

Similar Datasets

2012-08-27 | E-GEOD-33852 | biostudies-arrayexpress
2013-04-01 | GSE44648 | GEO
2013-04-01 | E-GEOD-44648 | biostudies-arrayexpress
2015-04-13 | E-GEOD-62284 | biostudies-arrayexpress
2015-04-13 | GSE62284 | GEO
2014-08-22 | E-GEOD-57315 | biostudies-arrayexpress
2018-10-26 | PXD005699 | Pride
2014-08-22 | GSE57315 | GEO
2020-08-11 | GSE119310 | GEO
2021-08-11 | GSE154865 | GEO