Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

ChIP-on-chip from murine myeloid cell line M1 and virus-induced myeloid leukemia cell lines for H3K4me3, H3K9/14ac, H3K4me1, H3K27me3, H3K9me3 and CTCF

ABSTRACT: Histone modifcations and CTCF binding at the c-myb locus were compared in cell lines with c-myb expressing, which are myeloblatic M1 cells and leukemia cells with virus integration, VS. M1 cells without c-myb expression induced by IL-6. Distribution of active histone marks at the c-myb gene and the upstream regions are associated with active c-myb transcription. The enrichment of all of these active histone marks decreased with differentiation-induced down-regulation of c-myb, but increased and spread in tumor cells.

ORGANISM(S): Mus musculus

PROVIDER: GSE34770 | GEO | 2012/09/01

SECONDARY ACCESSION(S): PRJNA150353

REPOSITORIES: GEO

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
		Other

Items per page:

1 - 1 of 1

Similar Datasets

ChIP-on-chip from murine myeloid cell line M1 and virus-induced myeloid leukemia cell lines for H3K4me3, H3K9/14ac, H3K4me1, H3K27me3, H3K9me3 and CTCF

Project description:Histone modifcations and CTCF binding at the c-myb locus were compared in cell lines with c-myb expressing, which are myeloblatic M1 cells and leukemia cells with virus integration, VS. M1 cells without c-myb expression induced by IL-6. Distribution of active histone marks at the c-myb gene and the upstream regions are associated with active c-myb transcription. The enrichment of all of these active histone marks decreased with differentiation-induced down-regulation of c-myb, but increased and spread in tumor cells. ChIP-on-chip from murine myeloid cell line M1 and virus-induced myeloid leukemia cell lines for H3K4me3, H3K9/14ac, H3K4me1, H3K27me3, H3K9me3 and CTCF

2012-09-01 | E-GEOD-34770 | biostudies-arrayexpress

ChIP-sequencing of histone marks in WT and Fmr1-/- (KO) neurons and mice

Project description:Widespread misregulation of histone modifcations occur in FXS, most notably increases in marks associated with active transcription.

2017-08-18 | GSE81911 | GEO

Distal regulation of c-myb expression during IL-6 induced differentiation in murine myeloid progenitor M1 cells [4C-seq]

Project description:We report genome-wide long-range interactions of the c-myb promoter in M1 cells.

2017-02-21 | GSE81029 | GEO

H3K9/14Ac in TC-797 genome

Project description:The goal is to localize "active" histone marks known to bind BRD4-NUT in the NMC genome. Characterization of the reference epigenome in humans by use of ChIP-Seq in the TC-797 human NMC cell line.

2013-03-05 | GSE36512 | GEO

H3K9/14Ac in TC-797 genome

2013-03-05 | E-GEOD-36512 | biostudies-arrayexpress

CUT&RUN analysis for phospho-MYB and active histone marks in FKBP-MYB Jurkat cells.

Project description:CUT&RUN analysis for phospho-MYB and active histone marks in FKBP-MYB Jurkat cells.

| PRJNA1111141 | ENA

ChIP-on-chip from acute myeloid leukemia cell lines and clinical samples for H3K4me3, H3K27me3, and EZH2

Project description:Histone modifcations at the p15INK4b gene were compared in sample with p15INK4b DNA methylation vs. samples with no DNA methylation AML clinical samples without DNA methylation exhibit bivalent histone modifications at p15INK4b, while clinical samples with DNA methylation display lower H3K4me3 and retain H3K27me3

2009-08-15 | GSE16730 | GEO

Myeloid cell derived inducible nitric oxide synthase suppresses M1 macrophage polarization

Project description:Analysis of gene expression between WT and iNOS defecient M1 macrophage RNA microarray was performed using RNA isolated from M1 polarized macrophages from WT and iNOS deficient mice stimulated with LPS/IFNγ for 6 hours. Total RNA was extracted using a RNeasy plus kit (QIAGEN, Valencia, CA), and the array was performed on an Illumina MouseRef-8 v2.0 expression beadchip (Illumina, USA) by the Genomics Core Facility at the Mount Sinai School of Medicine.

2015-02-02 | E-GEOD-65436 | biostudies-arrayexpress

Achromobacter sp. M1 strain:M1

Project description:Achromobacter sp. M1 strain:M1 Genome sequencing

| PRJNA1123257 | ENA

Staphylococcus aureus M1 strain:M1

Project description:Staphylococcus aureus M1 strain:M1 Genome sequencing

| PRJNA262670 | ENA