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Transcript profiling of Arabidopsis msh1 mutants

ABSTRACT: The Arabidopsis msh1 mutant show various growth phenotype. We use microarray analysis to characterize gene expression pattern for two of the phenotypes - variegation and stunted growth.

ORGANISM(S): Arabidopsis thaliana

PROVIDER: GSE35893 | GEO | 2012/07/12

SECONDARY ACCESSION(S): PRJNA151951

REPOSITORIES: GEO

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Transcript profiling of Arabidopsis msh1 mutants

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Project description:Arabidopsis msh1 mutants display developmental reprogramming (dr) phenotypes, include reduction in growth, enhanced branching, and delayed maturation and flowering time. MSH1-epi lines were derived by crossing msh1 lines with Col-0 wild type, followed by selection for homozygous MSH1/MSH1 F2 plants and serial self-pollination. MSH1-epiF3 plants displayed phenotypic variation in plant growth, showing enhanced growth, larger rosette diameter, thicker floral stems and earlier flowering time. We carried bisulfite sequencing and uncover the methylome changes accompany the heritable MSH1-epi phenotypes that condition dramatic variation in plant growth.

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