Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Expression Analysis of Normal and Cancerous Prostate Cells

ABSTRACT: Strand-specific RNA sequencing was done on a normal and a cancer cell line to examine how isoforms are used differently between these two states.

ORGANISM(S): Homo sapiens

PROVIDER: GSE38676 | GEO | 2012/11/30

SECONDARY ACCESSION(S): PRJNA168460

REPOSITORIES: GEO

ACCESS DATA

Json Xml

Similar Datasets

Expression Analysis of Normal and Cancerous Prostate Cells

Project description:Strand-specific RNA sequencing was done on a normal and a cancer cell line to examine how isoforms are used differently between these two states. One PrEC sample, a normal cell line. One LNCaP sample, a cancer cell line.

2012-11-30 | E-GEOD-38676 | biostudies-arrayexpress

Mapping of Transcription Start Sites of Normal and Cancerous Prostate Cells

Project description:Capped analysis of gene expression (CAGE) sequencing was done on a normal and a cancer cell line to examine how promoter usage changes between these two states.

2012-11-30 | GSE38677 | GEO

Mapping of Transcription Start Sites of Normal and Cancerous Prostate Cells

Project description:Capped analysis of gene expression (CAGE) sequencing was done on a normal and a cancer cell line to examine how promoter usage changes between these two states. One PrEC sample, a normal cell line. One LNCaP sample, a cancer cell line.

2012-11-30 | E-GEOD-38677 | biostudies-arrayexpress

H3K4me3 Marks in Normal and Cancerous Prostate Cells

Project description:H3K4me3 ChIP-seq was done to examine transcription start sites in a genome wide manner, and compare results to CAGE-seq One PrEC sample, a normal cell line. One LNCaP sample, a cancer cell line.

2012-11-30 | E-GEOD-38682 | biostudies-arrayexpress

H3K4me3 Marks in Normal and Cancerous Prostate Cells

Project description:H3K4me3 ChIP-seq was done to examine transcription start sites in a genome wide manner, and compare results to CAGE-seq

2012-11-30 | GSE38682 | GEO

Genomic DNA in Normal and Cancerous Prostate Cells

Project description:To investiagate copy number differences between PrEC and LNCaP cells, each was DNA sequenced. One PrEC sample, a normal cell line. One LNCaP sample, a cancer cell line.

2012-11-30 | E-GEOD-38674 | biostudies-arrayexpress

Chromatin Looping of Normal and Cancerous Prostate Cells

Project description:Mapping the locations of the DNA binding protein CTCF genome-wide to assess its colocalisation with expression domain boundaries. One PrEC sample, a normal cell line. One LNCaP sample, a cancer cell line.

2012-11-30 | E-GEOD-38684 | biostudies-arrayexpress

H3K27me3 Marks in Normal and Cancerous Prostate Cells

Project description:The histone modification H3K27me3 is representative of silenced regions of the genome. Changes between the normal and cancer state were investigated. Three PrEC samples, a normal cell line. Four LNCaP sample, a cancer cell line. Technical replicates.

2012-11-30 | E-GEOD-38683 | biostudies-arrayexpress

Transcriptome profiling of Normal and Cancerous Prostate Cells [expression array]

Project description:To identify aberrant non coding gene expression in prostate cancer, we performed expression profiling of normal prostate epithelial cells (PrEC) and the prostate cancer cell line LNCaP using Affymetrix HuGene 2.0 ST expression arrays. These expression arrays were validated by expression qPCR of selected genes.

2018-09-01 | GSE61790 | GEO

Normal and Cancerous Prostate Cells

Project description:This SuperSeries is composed of the SubSeries listed below.

2012-10-16 | GSE38685 | GEO