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Allele-specific expression in A. thaliana hybrids grown under control and drought stress conditions

ABSTRACT: We estimate Allele-specific expression in F1 hybrids between Col-0 and Cvi-0 accessions grown under well watered and drought stress conditions. We found that ~90% of the genes showed similar ASE under both stresses. Trans-effects were less robust across environments, however its effect was milder compared to cis-variation.

ORGANISM(S): Arabidopsis thaliana

PROVIDER: GSE43560 | GEO | 2015/06/25

SECONDARY ACCESSION(S): PRJNA186735

REPOSITORIES: GEO

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Allele-specific expression in A. thaliana hybrids grown under control and drought stress conditions

Project description:We estimate Allele-specific expression in F1 hybrids between Col-0 and Cvi-0 accessions grown under well watered and drought stress conditions. We found that ~90% of the genes showed similar ASE under both stresses. Trans-effects were less robust across environments, however its effect was milder compared to cis-variation. Assessment of ASE in different environments

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