Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Primary FDC

ABSTRACT: expression profiles of FDC and BMDC are compared Keywords: cell type comparison

ORGANISM(S): Mus musculus

PROVIDER: GSE4535 | GEO | 2006/10/04

SECONDARY ACCESSION(S): PRJNA94459

REPOSITORIES: GEO

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
		Other

Items per page:

1 - 1 of 1

Similar Datasets

Transcription profiling of mouse primary FDC and BMDC

Project description:expression profiles of FDC and BMDC are compared Experiment Overall Design: expression profiles of FDC and BMDC are compared

2008-06-13 | E-GEOD-4535 | biostudies-arrayexpress

FDC-E vs FDC-D

Project description:Comparison of follicular dendritic cell-enriched versus -depleted splenocytes Keywords: parallel sample

2005-03-04 | GSE2123 | GEO

Expression data from FDC-induced myeloid cells (FDMCs)

Project description:We observed that follicular dendritic cell line induced a new type of CD11b+ myeloid cells (FDMCs) when cultured with a lineage-negative c-kit+ population from mouse spleen cells. Thus, we used microarrays to characterize gene expression of FDMCs. FDMCs were induced on FDC line for RNA extraction and hybridization on Affymetrix microarrays. Microarray data of "FDC-induced myeloid cells (FDMCs)" sample were combined with a large collection of other cell- and tissue-specific gene expression data sets (total: 205 individual data sets). Raw data (.cel) files were normalized using Robust Multichip Analysis (RMA Express; http://rmaexpress.bmbolstad.com/), annotated using the latest libraries available from Affymetrix, and arranged according to cell-type grouping.

2013-06-23 | E-GEOD-45704 | biostudies-arrayexpress

Effect of FDC-SP on Gene Expression of Human Periodontal Ligament Cells

2014-09-13 | GSE61384 | GEO

Effect of FDC-SP on Gene Expression of Human Periodontal Ligament Cells

Project description:Previous research has reported that FDC-SP had similar molecular properties to statherin, a protein exists in saliva which plays important roles in preventing Ca precipitation. Further biomolecular study has suggested that the expression of FDC-SP may be associated with periodontal ligament (PDL) phenotype expression. Therefore, we hypothesized that FDC-SP may play specific roles in the inhibition of calcium precipitation during periodontal regeneration, as well as affect phenotype expression of periodontal ligament cells (PDLCs) during the differentiation process. To investigate this, we applied microarray technology to identify gene expression changes in hPDLCs transfected with FDC-SP and then clustered them according to their biological functions. We firstly established a recombinant lentiviral vector containing FDC-SP and obtained safe and efficient FDC-SP overexpression in human periodontal ligament cells (hPDLCs). After that, we applied Agilent Whole Human Genome Oligo Microarray (4M-CM-^W44K) to identify differentially expressed genes between empty vector-transfected hPDLCs and FDC-SP -transfected ones and then clustered them according to their biological functions. 3 independent experiments were performed and the empty vector-transfected hPDLCs were used as control.

2014-09-13 | E-GEOD-61384 | biostudies-arrayexpress

Basal gene expression of primary osteoblasts

Project description:Osteoblasts derived from different functional skeletal sites were analysed for gene expression profiles Keywords: Cell type comparison

2008-11-15 | GSE13607 | GEO

mRNA expression profile in wild-type and Lba1 (Trank1) KO bone marrow derived dendritic cell (BMDC) infected with Sendai virus

Project description:mRNA expression profiles were compared between wild-type and Lba1 KO BMDC infected with Sendai virus.

2024-02-15 | GSE225326 | GEO

Xanthomonas citri pv. citri FDC 217

Project description:Xanthomonas citri pv. citri FDC 217 genome sequencing

| PRJEB7148 | ENA

Xanthomonas citri pv. citri FDC 1083

Project description:Xanthomonas citri pv. citri FDC 1083 genome sequencing

| PRJEB7147 | ENA

Gene expression profiling of Follicular Lymphoma (FL) cultured in the presence or absence of the Follicular Dendritic Cell (FDC) line HK

Project description:Cells from 2 FL patients and 1 FL cell line were cultured for up to 48h, with no stroma or on top of HK cells pre-establised layers. RNA from FL cells was isolated after 24 and 48h of culture The aim of this study was to uncover the molecular mechanisms underlying the FL-FDC crosstalk Global RNA expression in FL cells that have been in contact or not with the FDC cell line HK

2014-08-04 | E-GEOD-54158 | biostudies-arrayexpress

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data