Transcriptomics

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Transcriptome of Sclerotinia sclerotiorum during vegetative growth, sclerotial development, myceliogenic germination, carpogenic germination, apothecium formation (stipe) and infection


ABSTRACT: The Solexa/Illumina’s digital gene expression (DGE) system was used to gain insight into the broad range of transcriptional responses during the vegetative growth, sclerotial development, myceliogenic germination, carpogenic germination, apothecium formation (stipe) and infection of Sclerotinia sclerotiorum. We obtained a sequencing depth of approximately 3.3 million clean tags per cDNA library. Tag mapping indicated that these six cDNA libraries in total represented more than 66.7% of all of the genes presented in the predicted transcript databases of the Broad Institute. Thouthands of differentially expressed genes were indentified during the various developmental stages compared to the vegetative growth stage. Our results could increase and deepen the understanding of the vegetative and reproductive development as well as the infection of S. sclerotiorum

ORGANISM(S): Sclerotinia sclerotiorum

PROVIDER: GSE65301 | GEO | 2016/05/19

SECONDARY ACCESSION(S): PRJNA273646

REPOSITORIES: GEO

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