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Exploring pathogenic microRNAs of rice sheath blight pathogen

ABSTRACT: We constructed seven small RNA libraries of Rhizoctonia solani AG1 IA and sequenced using Illumina GA II. The seven samples include mycelium cultured on PDA without rice incubated, 6 different stages at 10 hours (10h), 18h, 24h, 32h, 48h and 72h spanning the Rhizoctonia solani AG1 strains infection rice. We identified miRNA-like small RNAs (milRNAs) using MIREAP and mirdeep2. The milRNAs were used for further analysis of interactions between milRNA and mRNA that may involve in plant-infection.

ORGANISM(S): Rhizoctonia solani

PROVIDER: GSE68236 | GEO | 2016/04/23

SECONDARY ACCESSION(S): PRJNA282111

REPOSITORIES: GEO

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