Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Identification of a gene cluster involved in the utilization of phenylpropanoids in Corynebacterium glutamicum

ABSTRACT: This SuperSeries is composed of the SubSeries listed below.

ORGANISM(S): Gluconobacter oxydans Escherichia coli Corynebacterium glutamicum Bacillus subtilis subsp. subtilis str. 168

PROVIDER: GSE69449 | GEO | 2015/11/30

SECONDARY ACCESSION(S): PRJNA285529

REPOSITORIES: GEO

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
		Other

Items per page:

1 - 1 of 1

Similar Datasets

Comparison of Corynebacterium glutamicum

Project description:This SuperSeries is composed of the SubSeries listed below.

2020-03-24 | GSE138829 | GEO

Identification of a gene cluster involved in the utilization of phenylpropanoids in Corynebacterium glutamicum [set2]

Project description:DNA microarray experiments with phenylpropanoid pulses were performed in order to get hints on expression of relevant genes or gene clusters activated in presence of phenylpropanoid compounds. We determined the relative mRNA-levels of wild-type cells confronted with phenylpropanoids and unpulsed cells. A pulsing time of 30 minutes was sufficient to find regulation of gene expression in response to the phenylpropanoid amount of 5 mM (final concentration) added. A relatively short pulsing time was preferred over the cultivation of the strain with phenylpropanoids in comparison to growth on glucose because a completely different growth behavior was expected when using two completely unrelated carbon sources.

2015-11-30 | GSE69413 | GEO

Identification of a gene cluster involved in the utilization of phenylpropanoids in Corynebacterium glutamicum [set1]

2015-11-30 | GSE69412 | GEO

Gene expression changes in Corynebacterium glutamicum during iron limitation

Project description:This SuperSeries is composed of the SubSeries listed below.

2020-02-24 | GSE92397 | GEO

A compendium of expression profiles for Corynebacterium glutamicum ATCC13032

Project description:This SuperSeries is composed of the SubSeries listed below.

2022-07-22 | GSE171302 | GEO

Identification and functional analysis of the gene cluster for L-arabinose utilization in Corynebacterium glutamicum.

Project description:Corynebacterium glutamicum ATCC 31831 grew on l-arabinose as the sole carbon source at a specific growth rate that was twice that on d-glucose. The gene cluster responsible for l-arabinose utilization comprised a six-cistron transcriptional unit with a total length of 7.8 kb. Three l-arabinose-catabolizing genes, araA (encoding l-arabinose isomerase), araB (l-ribulokinase), and araD (l-ribulose-5-phosphate 4-epimerase), comprised the araBDA operon, upstream of which three other genes, araR (LacI-type transcriptional regulator), araE (l-arabinose transporter), and galM (putative aldose 1-epimerase), were present in the opposite direction. Inactivation of the araA, araB, or araD gene eliminated growth on l-arabinose, and each of the gene products was functionally homologous to its Escherichia coli counterpart. Moreover, compared to the wild-type strain, an araE disruptant exhibited a >80% decrease in the growth rate at a lower concentration of l-arabinose (3.6 g liter(-1)) but not at a higher concentration of l-arabinose (40 g liter(-1)). The expression of the araBDA operon and the araE gene was l-arabinose inducible and negatively regulated by the transcriptional regulator AraR. Disruption of araR eliminated the repression in the absence of l-arabinose. Expression of the regulon was not repressed by d-glucose, and simultaneous utilization of l-arabinose and d-glucose was observed in aerobically growing wild-type and araR deletion mutant cells. The regulatory mechanism of the l-arabinose regulon is, therefore, distinct from the carbon catabolite repression mechanism in other bacteria.

| S-EPMC2687266 | biostudies-literature

Identification of genes involved with P. aeruginosa biofilms

Project description:This SuperSeries is composed of the SubSeries listed below. Refer to individual Series

2015-05-11 | E-GEOD-65882 | biostudies-arrayexpress

Genome-wide analyses of C. glutamicum SigH

Project description:This SuperSeries is composed of the SubSeries listed below. Refer to individual Series

2014-11-24 | E-GEOD-52078 | biostudies-arrayexpress

Genome-wide analyses of C. glutamicum SigC

Project description:This SuperSeries is composed of the SubSeries listed below. Refer to individual Series

2016-08-22 | E-GEOD-72453 | biostudies-arrayexpress

Identification of genes involved with P. aeruginosa biofilms

Project description:This SuperSeries is composed of the SubSeries listed below.