Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Mat-Lylu cell line compared to G cell line

ABSTRACT: we analyzed the gene expression profiles of Mat-Lylu cell lines (in duplicate) compared to G cell lines (in duplicate) using Affymetrix tools and dChip software. The objective was to find metastasis-associated genes in prostate cancer, using this in vitro model. Keywords: cell line comparison

ORGANISM(S): Rattus norvegicus

PROVIDER: GSE7703 | GEO | 2009/05/12

SECONDARY ACCESSION(S): PRJNA99473

REPOSITORIES: GEO

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
		Other

Items per page:

1 - 1 of 1

Similar Datasets

Transcription profiling of rat Mat-Lylu cell line compared to G cell line

Project description:we analyzed the gene expression profiles of Mat-Lylu cell lines (in duplicate) compared to G cell lines (in duplicate) using Affymetrix tools and dChip software. The objective was to find metastasis-associated genes in prostate cancer, using this in vitro model. Experiment Overall Design: we used Mat_lylu cell line samples (duplicates) as the Experiment group and G cell line samples (duplicates) as control group.

2009-05-16 | E-GEOD-7703 | biostudies-arrayexpress

PTC versus paired normal thyroid tissue

Project description:we analyzed the gene expression profiles of 7 PTC samples compared to 7 paired normal samples using Affymetrix tools and dChip software. The objective was to find potential molecular markers for this disease Keywords: gene expression analysis

2006-06-30 | GSE3678 | GEO

Differential expression analysis of HFF cells in G0 phase compared to cells in G1 using MAT

Project description:This SuperSeries is composed of the following subset Series: GSE36154: Expression analysis of HFF cells in G0 phase [MAT] GSE36155: Expression analysis of HFF cells in G1 phase [MAT] GSE36156: Differential expression analysis of HFF cells in G0 phase compared to cells in G1 [MAT] Refer to individual Series

2012-06-05 | E-GEOD-36187 | biostudies-arrayexpress

Differential expression analysis of HFF cells in G0 phase compared to cells in G1 [MAT]

Project description:Whole transcriptome differential expression analysis of HFF cells on Affymetrix Human Tiling 1.0 array set. Cells were synchronised by serum starvation and transcriptome-wide changes occurring at the transition from G0 phase to G1 phase detected. Expression data and fold changes were processed with MAT (Johnson et al., "Model-based analysis of tiling-arrays for ChIP-chip." Proc Natl Acad Sci USA, 103:12457-62, 2006.).

2012-12-18 | GSE36156 | GEO

Expression analysis of colorectal carcinoma cells with defunct TP53 using MAT

Project description:Whole transcriptome expression analysis of colorectal carcinoma cells with defunct TP53 on Affymetrix Human Tiling 1.0 array set. Expression data were processed with MAT.

2016-01-31 | GSE29829 | GEO

Expression analysis of colorectal carcinoma cells with overexpressed TP53 using MAT

Project description:Whole transcriptome expression analysis of colorectal carcinoma cells with induced expression of TP53 on Affymetrix Human Tiling 1.0 array set. Expression data were processed with MAT.

2016-01-31 | GSE29830 | GEO

Differential expression analysis of HFF cells in G0 phase compared to cells in G1 [MAT]

2012-12-18 | E-GEOD-36156 | biostudies-arrayexpress

Transcription profiling of human papillary thyroid carcinoma and paired normal tissues

Project description:We analyzed the gene expression profiles of 7 papillary thyroid carcinoma samples compared to 7 paired normal samples using Affymetrix tools and dChip software. The objective was to find potential molecular markers for this disease

2007-07-03 | E-GEOD-3678 | biostudies-arrayexpress

Expression analysis of HFF cells in G1 phase [MAT]

Project description:Whole transcriptome expression analysis of HFF cells on Affymetrix Human Tiling 1.0 array set. Cells were synchronised by serum starvation and transcriptome-wide expression in G1 phase. Expression data were processed with MAT (Johnson et al., "Model-based analysis of tiling-arrays for ChIP-chip." Proc Natl Acad Sci USA, 103:12457-62, 2006.).

2012-12-18 | GSE36155 | GEO

Expression analysis of HFF cells in G0 phase [MAT]

Project description:Whole transcriptome expression analysis of HFF cells on Affymetrix Human Tiling 1.0 array set. Cells were synchronised by serum starvation and transcriptome-wide expression in G0 phase. Expression data were processed with MAT (Johnson et al., "Model-based analysis of tiling-arrays for ChIP-chip." Proc Natl Acad Sci USA, 103:12457-62, 2006.).

2012-12-18 | GSE36154 | GEO

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data