Genomics

Dataset Information

0

Genome-wide profiling of copy-number alteration in monoclonal gammopathy of undetermined significance


ABSTRACT: Monoclonal gammopathy of undetermined significance (MGUS) is a benign condition with an approximate 1% annual risk of symptomatic plasma cell disorder development, mostly to multiple myeloma (MM). We performed genome-wide screening of copy-number alterations (CNAs) in 90 MGUS and 33 MM patients using high-density DNA microarrays. We identified CNAs in a smaller proportion of MGUS (65.6%) than in MM (100.0%, p=1.31×10-5) and showed median number of CNAs is lower in MGUS (3, range 0-22) than in MM (13, range 4-38, p=1.82×10-10). In the MGUS cohort, the most frequent losses were located at 1p (5.6%), 6q (6.7%), 13q (30.0%), 14q (14.4%), 16q (8.9%), 21q (5.6%) and gains at 1q (23.3%), 2p (6.7%), 6p (13.3%) and Xq (7.8%). Hyperdiploidy was detected in 38.9% of MGUS cases and the most frequent whole chromosome gains were 3 (25.6%), 5 (23.3%), 9 (37.8%), 15 (23.3%) and 19 (32.2%). We also identified CNAs such as 1p, 6q, 8p, 12p, 13q, 16q losses, 1q gain and hypodiploidy, which are potentially associated with an adverse prognosis in MGUS. In summary, we showed that MGUS is similar to MM in that it is a genetically heterogeneous disorder, but overall cytogenetic instability is lower than in MM, which confirms that genetic abnormalities play important role in monoclonal gammopathies.

ORGANISM(S): Homo sapiens

PROVIDER: GSE77975 | GEO | 2016/02/18

SECONDARY ACCESSION(S): PRJNA312349

REPOSITORIES: GEO

Dataset's files

Source:
Action DRS
Other
Items per page:
1 - 1 of 1

Similar Datasets

2010-10-18 | GSE21349 | GEO
2010-11-02 | E-GEOD-21349 | biostudies-arrayexpress
2012-10-12 | GSE39381 | GEO
2012-10-12 | GSE39380 | GEO
2012-05-09 | E-GEOD-26389 | biostudies-arrayexpress
2012-05-10 | GSE26389 | GEO
2009-11-13 | GSE18820 | GEO
2009-11-23 | GSE16406 | GEO
2024-01-31 | GSE129801 | GEO
2024-07-16 | PXD051055 | Pride