Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

RNA-seq analysis of WT vs. Reck vascular KO P0 mouse brains

ABSTRACT: We examined, compared, and analyzed the transcriptome profile (RNA-seq) of WT vs Reck vascular KO (Reck flex2/Δex1; Tie2Cre) P0 mouse brains. Specifically, cortical transcriptomic differences (between WT and mutant genotypes) were compared separately from subcortical transcriptomic changes.

ORGANISM(S): Mus musculus

PROVIDER: GSE94814 | GEO | 2017/08/10

SECONDARY ACCESSION(S): PRJNA374503

REPOSITORIES: GEO

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
		Other

Items per page:

1 - 1 of 1

Similar Datasets

Global gene expression in P0 Gtf2ird1-/- mouse brains

Project description:A compairson of gene expression in the brains of P0 Gtf2ird1-/- and wildtype mice using the GeneChip Mouse Genome 430 2.0 Array (Affymetrix)

2011-12-31 | E-MTAB-622 | biostudies-arrayexpress

Mus musculus

Project description:RNA-seq analysis of WT vs. Reck vascular KO P0 mouse brains

| PRJNA374503 | ENA

mRNA sequencing of P0 primary WT and Mettl3/14nKO mouse islets

Project description:Using RNA-seq, we identified 945 differentially expressed genes in P0 KO islets, compared to WT（fc>1.5）. Among them, a cluster of genes involved in insulin secretion, ion transportation were significantly changed.

2020-04-24 | GSE149193 | GEO

P0 wild type tooth and skin

Project description:P0 whole tooth germ cells versus P0 skin cells

2020-06-27 | GSE99360 | GEO

Whole transcriptome sequencing of Npas3+/- and WT cortex at P0 stage

Project description:Purpose: To gain insight into the impact of NPAS3 deficiency on astrogenesis in mice, RNA-seq was used to analyze the genome-wide changes resulting from Npas3+/- and WT cortex at P0 stage. Methods: Total RNA was extracted from Npas3+/- and WT cortex at P0 stage. Then, total RNA was quantified and quality controlled by Agilent Bioanalyzer 2100 system. After cDNA library construction, the library preparations were sequenced on an Illumina NovaSeq 6000 platform in Novogene. Results: At significance cutoffs corresponding to FDR < 0.05, a total of 625 DEGs were identified in Npas3+/- mice. Conclusions: Our results show that Npas3+/- mice exhibit defective astrogenesis and abnormal synapse function.

2022-07-19 | GSE179608 | GEO

Piscirickettsia salmonis strain:P0

Project description:Piscirickettsia salmonis strain:P0 Genome sequencing

| PRJNA602937 | ENA

RNA-sequencing experiments comparing P0 control and RXRG/RARb double mutants frontal cortex

Project description:To understand the functional significance of RA signaling through the RXRG/RARB heterodimer in the developing cortex, we performed RNA-seq experiments comparing different regions of the P0 mouse frontal cortex (mPFC, secondary motor cortex (MOs)/ primary motor cortex (MOp), and OFC ) in Rarb and Rxrg dKO and WT littermate controls.

2021-01-01 | GSE142851 | GEO

Transcriptomic analysis of P0 mouse lung lymphatic endothelial cells

Project description:Transcriptomic analysis of P0 mouse lung lymphatic endothelial cells

| PRJNA878824 | ENA

Circular RNA sequencing of P0 and P2 generation chondrocytes

Project description:Purpose: Circular RNA sequencing was used to find out differentially expressed CircRNAs between P0 generation samples and P2 generation samples. Method: chondrocyte CircRNAs profiles of P0 generation samples and P2 generation samples were analyzed.

2023-08-02 | GSE236856 | GEO

Whole transcriptome sequencing of Npas3+/- and WT cortex at P0 stage

Project description:Whole transcriptome sequencing of Npas3+/- and WT cortex at P0 stage

| PRJNA744260 | ENA