GNPS - Translational Genome Mining for Natural Products
Ontology highlight
ABSTRACT:
INSTRUMENT(S): Orbitrap Fusion
ORGANISM(S): Escovopsis (ncbitaxon:150372)
SUBMITTER: 
Nadine Ziemert
PROVIDER: MSV000092511 | GNPS | Mon Jul 24 08:21:00 BST 2023
REPOSITORIES: GNPS
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Project description:Chemical extraction from different strains of Escovopsis
2023-07-24 | MSV000092511 | MassIVE
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Project description:Covering: 2016 to 2021With genetic information available for hundreds of thousands of organisms in publicly accessible databases, scientists have an unprecedented opportunity to meticulously survey the diversity and inner workings of life. The natural product research community has harnessed this breadth of sequence information to mine microbes, plants, and animals for biosynthetic enzymes capable of producing bioactive compounds. Several orthogonal genome mining strategies have been developed in recent years to target specific chemical features or biological properties of bioactive molecules using biosynthetic, resistance, or transporter proteins. These "biosynthetic hooks" allow researchers to query for biosynthetic gene clusters with a high probability of encoding previously undiscovered, bioactive compounds. This review highlights recent case studies that feature orthogonal approaches that exploit genomic information to specifically discover bioactive natural products and their gene clusters.
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