Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Proteomic analysis of bacteriophage fEV-1 infecting Yersinia pestis

ABSTRACT: Label-free data dependent acquisition mass spectrometry analysis of bacteriophage fEV-1 infecting Yersinia pestis.

INSTRUMENT(S): Q Exactive Plus

ORGANISM(S): Bacteriohage Fev-1

SUBMITTER: Lotta Happonen

PROVIDER: MSV000087668 | MassIVE | Sat Jun 19 13:23:00 BST 2021

SECONDARY ACCESSION(S): PXD026811

REPOSITORIES: MassIVE

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
		Other

Items per page:

1 - 1 of 1

Similar Datasets

Proteomic analysis of bacteriophage fD1 infecting Yersinia pestis

Project description:Label-free data dependent acquisition mass spectrometry analysis of bacteriophage fD1 infecting Yersinia pestis.

2021-06-20 | MSV000087670 | MassIVE

Proteomic analysis of Yersinia enterocolitica phage phiR201

Project description:DDA analysis of phage phiR201 infecting Yersinia enterocolitica using the Uniprot proteomes UP000002908 and UP000000642 as sequence database

2018-03-27 | MSV000082214 | MassIVE

E-PROT-71

Project description:Label-Free Absolute Protein Quantification with Data-Independent Acquisition

2022-01-26 | E-PROT-71 | ExpressionAtlas

Quantitative proteomic characterization and comparison of T helper 17 and iTreg cells

Project description:Using mass spectrometry-based label-free quantitative (LFQ) proteomics analysis of in vitro differentiated murine Th17 and induced T regulatory (iTreg) cells. More than 4000 proteins covering almost all subcellular compartments were detected. Quantitative comparison of the protein expression profiles resulted in the identification of proteins specifically expressed in the Th17 and iTreg cells. Importantly, our combined analysis of proteome and gene expression data revealed protein expression changes that were not associated with changes at the transcriptional level.

2018-05-31 | GSE104152 | GEO

Proteomics analysis of phage phiR201 infecting Yersinia enterocolitica

Project description:DDA analysis of phage phiR201 infecting Yersinia enterocolitica using the six-frame translated viral genome as a sequence database

2018-03-27 | MSV000082215 | MassIVE

Whole transcriptome sequencing of phage φR1-37 and its host Yersinia enterocolitica

Project description:RNA-sequencing was preformed from RNA isolated from bacteria infected with the bacteriophage. In order to reveal the phage-host interactions between φR1-37 and Yersinia enterocolitica throughout the phage infection cycle, both the transcriptomes were scrutinized during all the stages of infection.

2016-01-22 | GSE77068 | GEO

Biological characterization of virulent therapeutic bacteriophage PAK_P3 infecting Pseudomonas aeruginosa.

Project description:We have isolated and characterized several bacteriophages infecting Pseudomonas aeruginosa distantly related to Felix O1 virus and proposed they form a new subfamily named Felixounavirinae. The infectious cycle of bacteriophages belonging to this subfamily has not been studied yet in terms of gene expression. The present study reports the RNA-Seq analysis of bacteriophage PAK_P3 infecting PAK strain of P. aeruginosa.

2016-07-20 | GSE76513 | GEO

Biological characterization of virulent therapeutic bacteriophage PAK_P4 infecting Pseudomonas aeruginosa

2017-07-07 | GSE86022 | GEO

Analysis of differentially expressed proteins in Yersinia enterocolitica-infected HeLa cells

Project description:The purpose of our study was to fill this knowledge gap and to characterize the epithelial cell response to Yersinia enterocolitica infection by label-free proteomic quantification.

2022-02-22 | PXD002634 | Pride

proteomic survey of lung development and nmyc function in the lung

Project description:protein profiling of mouse lung organogenesis from embryonic day E13.5 until adulthood by gel-free two-dimensional liquid chromatography coupled to large-scale tandem mass spectrometry (MudPIT). protein expression in Nmyc loss of function mutant with a comparison to wildtype at E18 Keywords: protein, proteomics, Mudpit, lung, development, nuclear, cytosol, mitochondria, mouse

2007-04-24 | GSE6108 | GEO

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data