Dataset Information

Zhang_DDAnoDE_BioID_MSPLIT_P127_6600

ABSTRACT: This dataset consists of 10 raw MS files and associated peak lists and results files, acquired on AB Sciex TripleTOF 6600 mass spectrometer operated in Data Independent Acquisition mode. Samples were generated by Cassandra Wong. Mass spectrometry acquisition was performed by Cassandra Wong and Shen Zhang. Analysis was performed by Brett Larsen, Karen Colwill, Anne-Claude Gingras, Cassandra Wong, and Shen Zhang. The files are associated with a manuscript submitted for publication by Shen Zhang et al. The main goal of this paper was to further optimize a no dynamic exclusion (noDE) strategy for analysis of protein-protein interactions. This dataset presents a noDE strategy which identifies more high confidence protein interactors than traditional data-dependent acquisition (DDA) with DE and data-independent acquisition (DIA) approaches. Anne-Claude Gingras is the corresponding author of the manuscript (gingras@lunenfeld.ca); Anne-Claude Gingras should be contacted for questions on this dataset (gingras@lunenfeld.ca)

INSTRUMENT(S): TripleTOF 6600

ORGANISM(S): Homo Sapiens (ncbitaxon:9606)

SUBMITTER: Anne-Claude Gingras