Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Lab_8_Untargeted_Metabolomics_Tubingen_Summer_School

ABSTRACT: Converted from profile raw to centroid mzML data with ThermoRawFileParser executable through macOS: Algae bloom simulation Lab 8 for the course Untargeted Metabolomics Summer School 2022

INSTRUMENT(S): Q Exactive HF

ORGANISM(S): Synechococcus (ncbitaxon:1129)

SUBMITTER: Daniel Petras

PROVIDER: MSV000090183 | MassIVE | Tue Aug 23 01:08:00 BST 2022

REPOSITORIES: MassIVE

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
		Other

Items per page:

1 - 1 of 1

Similar Datasets

GNPS - Lab_8_Untargeted_Metabolomics_Tubingen_Summer_School

Project description:Converted from profile raw to centroid mzML data with ThermoRawFileParser executable through macOS: Algae bloom simulation Lab 8 for the course Untargeted Metabolomics Summer School 2022

2022-08-23 | MSV000090183 | GNPS

Project description:Summer school 2022

| PRJNA1168159 | ENA

GNPS - Tsunoda Diphenhydramine Study - reupload for summer school

Project description:study of diphenhydramine in blood and skin - untargeted mass spectrometry analysis [doi:10.25345/C5SJ2X] - reupload for summer school

2023-07-10 | MSV000092389 | GNPS

Algae decay simulation

Project description:Algae decay simulation

| OEX00019976 | NODE

Nutritional regulation of pathogenesis gene expression in Pseudomonas syringae

Project description:Pseudomonas syringae was grown on minimal media and King's B medium. The goal of this project was to generate pilot data in preparation for a summer course on high-throughput sequencing where participants prepared their own RNA-Seq libraries and analyzed the resulting data. The summer course was funded by NIH grant 5R25EB023928-03 "A hands-on, integrative next-generation sequencing course: design, experiment, and analysis".

2021-02-22 | GSE160315 | GEO

2022 Mated-unmated honey bee queen comparison

Project description:Hemolymph from mated and unmated honey bee queens collected in summer 2022.

2024-01-10 | MSV000093805 | MassIVE

GNPS_Metabolomics_SummerSchool_2023

Project description:Subset of MassIVE MSV000085944 data published by Panitchpakdi and collaborators (2022) used during Metabolomics Summer School 2023 at Statens Serum Institut, Copenhagen. Panitchpakdi M, Weldon KC, Jarmusch AK, Gentry EC, Choi A, Sepulveda Y, et al. (2022) Non-invasive skin sampling detects systemically administered drugs in humans. PLoS ONE 17(7): e0271794. https://doi.org/10.1371/journal.pone.0271794

2023-06-29 | MSV000092307 | GNPS

Mar1 deletion and RNA enrichment in Cryptococcus neoformans: pilot data for a high-throughput sequencing course

Project description:Mar1 deletion and RNA enrichment in Cryptococcus neoformans: pilot data for a high-throughput sequencing course. The goal of this project was to generate pilot data in preparation for a summer course on high-throughput sequencing where participants prepared their own RNA-Seq libraries and analyzed the resulting data. This pilot experiment addressed two questions: 1. Does this experimental system (Cryptococcus neoformans H99 wildtype and mar1 deletion mutant grown in YPD and tissue culture media) provide a good dataset for course participants to analyze. 2. Which rRNA depletion method is best to use in the wetlab component of the course. This data was generated in preparation for the intensive summer course on high-throughput sequencing, funded by NIH grant 5R25EB023928-03 "A hands-on, integrative next-generation sequencing course: design, experiment, and analysis".

2021-02-22 | GSE160397 | GEO

Genome-wide analysis of gene expression in human iPSCs and NSCs engineered by safe-harbor TALEN-mediated gene targeting

Project description:Human iPSCs and NSCs were engineered by AAVS1 and/or C13 safe-harbor TALENs which mediated targeted integration of various reporter genes at single or dual safe-harbor loci. Multiple clones of targeted human iPSCs were used to compare with parental untargeted NCRM5 iPSCs. Polyclonal targeted human NSCs were used to compare with their parental untargeted NCRM1NSCs or H9NSCs. Total RNA obtained from targeted human iPSCs or NSCs compared to untargeted control iPSCs or NSCs.

2014-09-01 | E-GEOD-55975 | biostudies-arrayexpress