Metabolomics

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The natural variance of the Arabidopsis floral secondary metabolites


ABSTRACT: Application of mass spectrometry-based metabolomics enables the detection of genotype-related natural variance in metabolism. Differences in secondary metabolite composition of flowers of 64 Arabidopsis thaliana (Arabidopsis) natural accessions, representing a considerable portion of the natural variation in this species are presented. The raw metabolomic data of the accessions and reference extracts derived from flavonoid knockout mutants have been deposited in the MetaboLights database. Additionally, summary tables of floral secondary metabolite data are presented in this article to enable efficient re-use of the dataset either in metabolomics cross-study comparisons or correlation-based integrative analysis of other metabolomic and phenotypic features such as transcripts, proteins and growth and flowering related phenotypes.

INSTRUMENT(S): LTQ XL (Thermo Scientific)

SUBMITTER: Takayuki Tohge 

PROVIDER: MTBLS528 | MetaboLights | 2018-04-03

REPOSITORIES: MetaboLights

Dataset's files

Source:
Action DRS
MTBLS528 Other
FILES Other
a_MTBLS528_metabolite_profiling_mass_spectrometry.txt Txt
i_Investigation.txt Txt
m_MTBLS528_metabolite_profiling_mass_spectrometry_v2_maf.tsv Tabular
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The natural variance of the Arabidopsis floral secondary metabolites.

Tohge Takayuki T   Borghi Monica M   Fernie Alisdair R AR  

Scientific data 20180403


Application of mass spectrometry-based metabolomics enables the detection of genotype-related natural variance in metabolism. Differences in secondary metabolite composition of flowers of 64 Arabidopsis thaliana (Arabidopsis) natural accessions, representing a considerable portion of the natural variation in this species are presented. The raw metabolomic data of the accessions and reference extracts derived from flavonoid knockout mutants have been deposited in the MetaboLights database. Additi  ...[more]

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