A multi-omic profiles of fruits regarding the maturation of Olive (Olea europaea L.) (GC-MS assay)

ABSTRACT:

Olive (Olea europaea) has a long history of medicinal and nutritional values own to it rich in polyphenol and fatty acids (FAs) in fruits. In order to better understand the biosynthesis important of these metabolites, we generated comprehensive Iso-Seq full-length and illumina RNA-seq transcriptome, and targeted metabolomics dataset of different olive fruits maturity. The targeted metabolomics by using both GC/MS and LC/MS were totally quantified 35 FAs and 13 polyphenols. Iso-Seq library was constructed and sequenced by PacBio Sequel System, and a total of 5,891,652 (10.55 G) with an average length of 1,791 subreads were obtained. 492,350 circular consensus sequences (CCSs) were formed after merging and error correction through subread comparison. Of the 492,350 CCSs, 399,263 were found to be full-length non chimera (FLNC) reads, and 187,517 consensus reads were finally obtained by using clustering algorithm of Iterative clustering for error (IEC). These multiomics data provide a foundation to elucidate the mechanisms regulating biosynthesis of polyphenol and FAs during the maturation of olive fruits.

GC-MS protocols and data are reported in the current study MTBLS855.

Polyphenols UPLC-MS protocols and data associated to this study are reported in MTBLS814.

Tyrosol only UPLC-MS protocols and data associated to this study are reported in MTBLS1127.

INSTRUMENT(S): GC-MS

SUBMITTER: Guodong Rao 

PROVIDER: MTBLS855 | MetaboLights | 2019-05-07

REPOSITORIES: MetaboLights