Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Selective sweeps in local sheep populations

ABSTRACT: The genome of two local sheep breeds from the Basque Country, Sasi Ardi and Latxa, have been resequenced and scanned searching for selective sweeps related with natural and artificial selection.

PROVIDER: PRJEB21942 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	ERR2099815_1.fastq.gz	Fastqsanger.gz
	ERR2099815_2.fastq.gz	Fastqsanger.gz
	ERR2099816_1.fastq.gz	Fastqsanger.gz
	ERR2099816_2.fastq.gz	Fastqsanger.gz
	ERR2099817_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 6

Similar Datasets

Pig Longissimus muscle: comparison between Basque and Large White breeds

Project description:Transcriptional profiling of pig skeletal muscle comparing two divergent breeds: Large white (LW, conventional) and Basque (B, local, indigeneous).

2012-11-20 | GSE26614 | GEO

Pig adipose tissue: comparison between Basque and Large White breeds

Project description:Transcriptional profiling of pig adipose tissue comparing two divergent breeds: Large white (LW, conventional) and Basque (B, local, indigeneous).

2012-12-03 | GSE34161 | GEO

Pig Longissimus muscle in Basque and Large White pigs reared in 3 different rearing systems

2013-01-10 | GSE33958 | GEO

Pig Longissimus muscle: comparison between Basque and Large White breeds

Project description:Transcriptional profiling of pig skeletal muscle comparing two divergent breeds: Large white (LW, conventional) and Basque (B, local, indigeneous). Two-condition experiment, LW vs. B muscles. Biological replicates: 20 B and 20 LW. One replicate per array.

2012-11-20 | E-GEOD-26614 | biostudies-arrayexpress

Pig Longissimus muscle in Basque and Large White pigs reared in 3 different rearing systems

Project description:Transcriptional profiling of pig skeletal muscle in 2 breeds [(Large white , LW, conventional) and (Basque, B, local, indigeneous)] and 3 rearing systems [(Conventional, C), (Alternative, A) and (Extensive, E)]. 5 groups (BC,BA,BE,LWC and LWA) of 10 samples (i.e. biological replicates). One replicate per array.

2013-01-10 | E-GEOD-33958 | biostudies-arrayexpress

Pig adipose tissue: comparison between Basque and Large White breeds

Project description:Transcriptional profiling of pig adipose tissue comparing two divergent breeds: Large white (LW, conventional) and Basque (B, local, indigeneous). Four-condition experiment, LW vs. B muscles at 35 kg and 145 kg live weight. Biological replicates: at 145 kg, 10 B and 10 LW; at 35 kg 5 B and 5 LW. One replicate per array.

2012-12-03 | E-GEOD-34161 | biostudies-arrayexpress

Sus scrofa

Project description:Pig Longissimus muscle: comparison between Basque and Large White breeds

| PRJNA136425 | ENA

Sus scrofa

Project description:Pig adipose tissue: comparison between Basque and Large White breeds

| PRJNA150043 | ENA

Arising selective sweeps in Andean high altitude populations

Project description:Arising selective sweeps in Andean high altitude populations

| PRJEB14828 | ENA

Cross breed RNASEQ analysis of cervical tissues in sheep

Project description:Aim to characterize the cervical transcriptome of four European ewe breeds with known differences in pregnancy rates following cervical AI using frozen-thawed semen.

2021-07-08 | GSE179486 | GEO

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data