Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Haemonchus contortus Genome sequencing

ABSTRACT: Genomic assembly of nematode Haemonchus contortus, as part of the 50 Helminth Genomes Initiative; sequencing of the parasitic worms that have the greatest impact on human, agricultural and veterinary disease and cause significant global health issues particularly in the developing world, or those used as model organisms.

PROVIDER: PRJEB506 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	CAVP01.dat.gz	Other
	CAVP01.fasta.gz	Fasta.gz
	CAVP01.master.dat	Other
	CAVP01.dat.gz	Other

Items per page:

1 - 4 of 4

Similar Datasets

MicroRNA microarray of Haemonchus contortus lifecycle stages and gut tissue

Project description:Examined expression of microRNAs in different life-cycle stages and gut tissue of the pathogenic nematode Haemonchus contortus and identified differentially expressed miRNAs. Custom array contained probes to 609 Haemonchus contortus miRNA sequence (all mature and start miRNAs identified by Winter et al., 2012, BMC Genomics13:4; DOI: 10.1186/1471-2164-13-4) and all C. elegans sequences in miRBase release 16

2017-11-07 | GSE101501 | GEO

Haemonchus contortus

Project description:Haemonchus contortus

| PRJNA355622 | ENA

High-throughput sequencing of small RNAs from Brugia pahangi and Haemonchus contortus

Project description:Illumina sequencing of small RNAs from Brugia pahangi and Haemonchus contortus

2011-12-20 | GSE34539 | GEO

Haemonchus contortus

Project description:Haemonchus contortus overview

| PRJNA193279 | ENA

Haemonchus contortus

Project description:Haemonchus contortus Genome sequencing

| PRJNA193158 | ENA

Haemonchus contortus

Project description:Haemonchus contortus transcriptome profiling

| PRJNA772807 | ENA

Haemonchus contortus

Project description:haemonchus contortus circRNA sequencing reads

| PRJNA756739 | ENA

Haemonchus contortus

Project description:Haemonchus contortus Transcriptome or Gene expression

| PRJNA264197 | ENA

High-throughput sequencing of small RNAs from Brugia pahangi and Haemonchus contortus

Project description:Illumina sequencing of small RNAs from Brugia pahangi and Haemonchus contortus 4 samples examined, larval stage 3 and mixed sex adults from two parasitic nematode species.

2011-12-20 | E-GEOD-34539 | biostudies-arrayexpress

Haemonchus contortus transcriptome

Project description:Haemonchus contortus is a highly pathogenic parasitic nematode of that can infect a large number of wild and domesticated ruminant species and is the most economically important parasite of sheep and goats worldwide. Although originally a tropical parasite, it has been disseminated around the world by livestock movement and can now be found as far north as the arctic circle. Adult worms are blood feeders that reside in the abomasum (stomach) and are approximately 2cm in length when mature. They are dioecious with single females typically producing several thousand eggs per day which pass out of the host in faeces and develop to infective larvae on the pasture. H. contortus is a member of the superfamily trichostrongyloidea (Strongylida) which contains most of the economically important parasitic nematodes of grazing livestock. These parasites cost the global livestock industry billions of dollars per annum in lost production and drug costs. Resistance to all the major anthelmintic classes is now common worldwide often leading to failure of treatment and control. H. contortus is a close relative of the human hookworm species and belongs to the nearest phylogenetic group of parasites to the free-living model nematode Caenorhabditis elegans . This makes it an important model of parasitic nematode biology that is commonly used for experimental studies. The main objective of this project is to recognize genes expressed in the life stages of H. contortus.This data is part of a pre-publication release. For information on the proper use of pre-publication data shared by the Wellcome Trust Sanger Institute (including details of any publication moratoria), please see http://www.sanger.ac.uk/datasharing/

2013-02-12 | E-ERAD-143 | biostudies-arrayexpress

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data