Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Cardamine hirsuta

ABSTRACT: Cardamine hirsuta overview

PROVIDER: PRJNA230424 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR20613700_1.fastq.gz	Fastqsanger.gz
	SRR20613700_2.fastq.gz	Fastqsanger.gz
	SRR20613800_1.fastq.gz	Fastqsanger.gz
	SRR20613800_2.fastq.gz	Fastqsanger.gz
	SRR20613900_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 1507

Similar Datasets

Effect of ChCUC1 induction on gene expression in Cardamine hirsuta leaf development

Project description:Here we investigate the function of CUC1(CUP-SHAPED COTYLEDON1) in the diversification of leaf forms between simple-leaved Arabidopsis thaliana and compound-leaved Cardamine hirsuta. CUC transcription factors are conserved regulators in leaf margin dissection and leaflet formation. ChCUC1, ChCUC2 and ChCUC3 function redundantly and are required for the leaflet formation in C. hirsuta. Recently we discovered that ChCUC1 has species species-specific expression in young leaves of C.hirsuta. Moreover, interspecies gene transfer of ChCUC1 allele into A.thaliana is sufficient to increase leaf complexity. On this basis, we hypothesize that redeployment of ChCUC1 in leaves contributes to the formation of leaflets instead of serrations. However, the mechanism underlying ChCUC1 regulating cell division, cell polarity, cytoskeleton and thus leaf marginal patterning remains elusive. To this end, we make use of chromatin immunoprecipitation sequencing(ChIP-seq), transcriptomic, comparative genetics and advanced imaging approaches to identify the downstream regulating genes of ChCUC1.

2024-05-31 | GSE241051 | GEO

Cardamine hirsuta strain:OX

Project description:Cardamine hirsuta strain:OX Transcriptome or Gene expression

| PRJNA206062 | ENA

Cardamine hirsuta strain:OX, inbred

Project description:Cardamine hirsuta strain:OX, inbred Targeted Locus (Loci)

| PRJNA226676 | ENA

Arabis alpina and Cardamine hirsuta

Project description:Arabis alpina and Cardamine hirsuta Transcriptome or Gene expression

| PRJNA260006 | ENA

Expressions of Cardamine amara, hirsuta and flexuorsa under wet and dry conditions

Project description:To understand allopoyploid speciation into hydrologically fluctuating niches, we observed gene expressions of two parental species and their allotetraploid species under wet and dry conditions Gene expression of leafs from control, dry and wet conditions over three Caramine species: C. amara, C. hirsuta and C. flexuosa

2016-07-01 | E-GEOD-77673 | biostudies-arrayexpress

RNAseq of submergence response of the flood tolerant Cardamineae tribe

Project description:Pot grown plants of Arabidopsis thaliana, Cardamine hirsuta, Cardamine pratensis, Rorippa palustris and Rorippa sylvestris where completely submerged under ambient light conditions. After 24 and 48 hours the shoots were harvested for expression analysis. Differential expression analysis, taking into account unsubmerged control plants revealed that the Rorippa genus had a pronounced down regulation of the cell cycle whereas the Cardamine had an attenuated response to submergence.

2024-04-01 | E-MTAB-13910 | biostudies-arrayexpress

Cardamine hupingshanensis

Project description:Cardamine hupingshanensis overview

| PRJNA755772 | ENA

Cardamine lyrata

Project description:Cardamine lyrata overview

| PRJNA823451 | ENA

Cardamine leucantha

Project description:Cardamine leucantha overview

| PRJNA635725 | ENA

Cardamine resedifolia

Project description:Cardamine resedifolia overview