Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Symbiodinium kawagutii strain:CCMP2468

ABSTRACT: Symbiodinium kawagutii strain:CCMP2468 Genome sequencing

PROVIDER: PRJNA242224 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Similar Datasets

Symbiodinium kawagutii

Project description:Symbiodinium kawagutii overview

| PRJNA556291 | ENA

Symbiodinium kawagutii strain:SL-2019

Project description:Symbiodinium kawagutii strain:SL-2019 Genome sequencing and assembly

| PRJNA556154 | ENA

The transcriptomic response of the coral Acropora digitifera to a competent Symbiodinium strain: the symbiosome as an arrested early phagosome

Project description:Despite the ecological significance of the relationship between reef-building corals and intracellular photosynthetic dinoflagellates of the genus Symbiodinium, very little is known about the molecular mechanisms involved in the establishment of the relationship. Indeed, microarray-based analyses point to the conclusion that host gene expression is largely or completely unresponsive during the establishment of symbiosis with a competent strain of Symbiodinium. In the present study, the use of Illumina RNAseq technology allowed detection of a transient period of differential expression involving a small number of genes (1073 transcripts; <3% of the transcriptome) 4h after the exposure of Acropora digitifera planulae to a competent strain of Symbiodinium (a clade B strain). This phenomenon has not previously been detected as a consequence of both the lower sensitivity of the microarray approaches used and the sampling times used. The results imply that complex changes occur, including transient suppression of mitochondrial metabolism and protein synthesis, but are also consistent with the hypothesis that the symbiosome is a phagosome that has undergone early arrest, raising the possibility of common mechanisms in the symbiotic interactions of corals and symbiotic sea anemones with their endosymbionts.

2016-04-03 | GSE76976 | GEO

Chromosome-scale assembly of the Symbiodinium microadriaticum genome

Project description:Hi-C assisted genome assembly of the Symbiodinium microadriaticum genome

2021-02-12 | GSE152150 | GEO

The transcriptomic response of the coral Acropora digitifera to a competent Symbiodinium strain: the symbiosome as an arrested early phagosome

2016-04-03 | E-GEOD-76976 | biostudies-arrayexpress

Symbiodinium microadriaticum strain:CCMP2467

Project description:Symbiodinium microadriaticum strain:CCMP2467 Genome sequencing and assembly

| PRJNA292355 | ENA

Sex, Scavengers, and Chaperones: Transcriptome Secrets of Divergent Symbiodinium Thermal Tolerances

Project description:Using transcriptomics, we show that Symbiodinium acclimation to elevated temperature involves up-regulated expression of meiosis genes followed by up-regulated expression of numerous reactive oxygen species scavenging genes and molecular chaperone genes. Our study connects Symbiodinium transcriptional regulation with physiological heat stress responses as well as known bleaching responses of corals harboring these same Symbiodinium. By uncovering these critical links, we greatly advance understanding of the bleaching susceptibility of corals, which is a key process responsible for global coral reef health.

2016-06-08 | GSE72763 | GEO

Symbiodinium strain:SSB01

Project description:Symbiodinium strain:SSB01 Transcriptome or Gene expression

| PRJNA203562 | ENA

Symbiodinium microadriaticum

Project description:whole genome sequencing of Symbiodinium microadriaticum

| PRJDB8520 | ENA

Symbiodinium

Project description:Belize coral Symbiodinium

| PRJNA373862 | ENA