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Glycine max

ABSTRACT: Genome-Wide Small RNA Profiling of a Soybean Seed Compartment-Cotyledon Stage

PROVIDER: PRJNA248316 | ENA |

REPOSITORIES: ENA

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Dataset's files

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			Action	DRS
	SRR1295520.fastq.gz	Fastqsanger.gz
	SRR1295530.fastq.gz	Fastqsanger.gz
	SRR1295521.fastq.gz	Fastqsanger.gz
	SRR1295531.fastq.gz	Fastqsanger.gz
	SRR1295522.fastq.gz	Fastqsanger.gz

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Project description:Expression data from soybean seed compartments with embryos at the cotyledon stage

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Transcription profiling of soybean seed compartments with embryos at the cotyledon stage

Project description:We microdissected each compartment from 8-micron paraffin sections using the Leica LMD6000 system to identify all genes active in different compartments of a soybean seed containing a cotyledon-stage embryo. Experiment Overall Design: cotyledon-stage seed compartments were isolated using the Leica LMD6000 system. Total RNA was amplified and hybridized with Affymetrix Soybean Genome Arrays.

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Genome-Wide Small RNA Profiling of a Soybean Seed Compartment

Project description:We report the genome-wide small RNA of soybean early maturation seed coat parenchyma compartment soybean early maturation seeds using Illumina high-throughput sequencing technology. Illumina sequencing of small RNA from early maturation seed coat parenchyma compartment and early-maturation stage whole seeds

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Soybean cell atlas gene expression profile

Project description:The nuclei of Glycine max from different tissues were collected. The samples were: soybean seed mid-maturation stage (10mm), seed late cotyledon stage (5mm), seed early cotyledon stage (3mm), seed heart stage (1mm), soybean green pods without seeds (stage), soybean flower bud (early flowering stage), soybean shoot apical meristem (stage), soybean trifoliate leaf (R5 stage), and soybean true leave (stage). The library construction was performed applying 10 Genomics technology.

2024-07-08 | GSE234864 | GEO

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