Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Esox lucius

ABSTRACT: Esox lucius Transcriptome

PROVIDER: PRJNA256965 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR1533660_1.fastq.gz	Fastqsanger.gz
	SRR1533660_2.fastq.gz	Fastqsanger.gz
	SRR1533651_1.fastq.gz	Fastqsanger.gz
	SRR1533651_2.fastq.gz	Fastqsanger.gz
	SRR1533661_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 22

Similar Datasets

Esox lucius transcriptome

Project description:Expression data from 13 tissues in Esox lucius using RNA-seq

2014-04-11 | GSE56679 | GEO

Esox lucius

Project description:Esox lucius overview

| PRJNA221736 | ENA

Esox lucius

Project description:Esox lucius Raw sequence reads

| PRJNA579326 | ENA

Esox lucius

Project description:Esox lucius Genome sequencing and assembly

| PRJNA514887 | ENA

Esox lucius

Project description:Esox lucius Genome sequencing and assembly

| PRJNA221548 | ENA

Esox lucius

Project description:Identifying and characterizing the sex locus of Esox lucius

| PRJNA514888 | ENA

Esox lucius isolate:fEsoLuc1

Project description:Esox lucius (northern pike) genome, fEsoLuc1, primary haplotype

| PRJNA561977 | ENA

Esox lucius isolate:fEsoLuc1

Project description:Esox lucius (northern pike) genome, fEsoLuc1, alternate haplotype

| PRJNA561978 | ENA

Proteome of mature flatworm Triaenophorus crassus (Bothriocephalidea:Triaenophoridae) from pike Esox lucius

Project description:Adult pike Esox lucius was caught in the end of summer (August, 2020) in Teletskoye Lake (Altai region, west Siberia, Russia, 51°79’10’’ N, 87°30’43’’E). Parasite (Triaenophorus crassus) was retrieved from the intestine of pike and immediately frozen in liquid nitrogen. After that, the sample was lyophilized and sent in ice (-20 °C) to the Group of mass spectrometry of Shemyakin-Ovchinnikov Institute of Bioorganic Chemistry RAS (Moscow, Russia) where further analysis was performed.

2021-10-28 | PXD028112 | Pride

RNA-Seq of liver tissue samples from northern pike (Esox lucius), coho salmon (Oncorhynchus kisutch) and Arctic charr (Salvelinus alpinus)

Project description:The aim of this sequencing experiment was to make available liver tissue expression for selected fish species, northern pike (Esox lucius, Eluc), coho salmon (Oncorhynchus kisutch, Okis) and Arctic charr (Salvelinus alpinus, Salp), for comparative expression studies between the species. Samples in replicate of four were sacrificed according to protocols at each of the facilities from where samples were obtained. RNA was extracted from samples and Illumina TruSeq Stranded mRNA libraries were built. Sequencing was performed in two passes on an Illumina HiSeq2500, paired-end 125bp reads. Processed count tables per species as raw counts, FPKM, or TPM, were generated from read alignment to the NCBI genomes of the respective species using STAR and gene level counting using RSEM and NCBI gene annotation.

2020-04-30 | E-MTAB-8962 | biostudies-arrayexpress

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data