Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Ustilago maydis strain:ATCC bA22899

ABSTRACT: Ustilago maydis strain:ATCC bA22899 Genome sequencing and assembly

PROVIDER: PRJNA324064 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	LYZD01.dat.gz	Other
	LYZD01.fasta.gz	Fasta.gz
	LYZD01.master.dat	Other
	LYZD01.dat.gz	Other

Items per page:

1 - 4 of 4

Similar Datasets

Ustilago maydis strain:ATCC 22901

Project description:Ustilago maydis strain:ATCC 22901 Genome sequencing and assembly

| PRJNA324337 | ENA

Ustilago maydis strain:ATCC 22904

Project description:Ustilago maydis strain:ATCC 22904 Genome sequencing and assembly

| PRJNA324353 | ENA

Ustilago maydis

Project description:Ustilago maydis Genome sequencing and assembly

| PRJNA506543 | ENA

Maize gene expression during infection with Ustilago maydis strain SG200∆fox1

Project description:Ustilago maydis is a plant-pathogenic fungus that establishes a biotrophic relationship with its host Zea mays. The biotrophic interaction is initiated upon host penetration, and involves expansion of the host plasma membrane around hyphae, which is thought to facilitate the exchange of nutrients and virulence factors. Transcriptional regulators involved in the establishment of an infectious dikaryon and penetration into the host have been identified, however, regulators involved in the post-penetration stages remained to be elucidated. In the study we report the identification of an Ustilago maydis forkhead transcription factor, Fox1, which is exclusively expressed during biotrophic development. Deletion of fox1 results in reduced virulence and impaired tumour development in planta. Δfox1 hyphae induce plant defences including the overproduction and accumulation of H2O2 in and around infected cells. This oxidative burst acts as an intercellular signal, which elicits a specific host defence response phenotypically represented by the encasement of proliferating hyphae in extensions of the plant cell wall. Maize microarrays experiments were performed to identify genes involved in the observed plant defence responses on leaf tissue infected with U. maydis strain SG200∆fox1 4 dpi.

2010-12-31 | GSE19559 | GEO

Expression analysis of Pseudozyma antarctica T-34 and Ustilago maydis on different carbon source

Project description:Investigation of whole genome gene expression level in Pseudozyma antarctica T-34, compared to Ustilago maydis UM521. To clarify the transcriptomic characteristics of Pseudozyma antarctica under the conditions of high MEL production, a DNA microarray of both the strains, Pseudozyma antarctica T-34 and Ustilago maydis UM521 was prepared and analyzed the transcriptomes. A DNA chip study using mRNA from the cultures of Pseudozyma antarctica T-34 and Ustilago maydis UM521 demonstrated the gene expression level of each strain.

2014-03-21 | E-GEOD-47171 | biostudies-arrayexpress

Ustilago maydis strain:AB33P5deltaR

Project description:Ustilago maydis strain:AB33P5deltaR Genome sequencing and assembly

| PRJNA324356 | ENA

Ustilago maydis strain:RK818

Project description:Ustilago maydis strain:RK818 Genome sequencing and assembly

| PRJNA322266 | ENA

RNAseq of Ustilago maydis strain AB31 and AB31_delta_Num1

Project description:To elucidate the role of Num1 (Um01682) in Ustilago maydis, the transcriptome of wild type and Num1 deletion mutants was determined by RNAseq after b-heterodimer induction

2013-12-09 | E-MTAB-1300 | biostudies-arrayexpress

Ustilago maydis

Project description:Genome sequencing of Ustilago maydis ITA-Chassis strain

| PRJNA592070 | ENA

mRNA profiling in Ustilago maydis under RUS (repopulation/regrowth under starvation)

Project description:mRNAs comparison between Ustilago maydis wild type grown in diluted YEPS (control) and in cell-free supernatants of Ustilago maydis wild type treated with H202 in two different concentrations (0.4% and 0.7%).

2022-06-16 | GSE205897 | GEO

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data